RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 VIPAS39Q9H9C1 493 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 TMBIM4Q9HC24 238 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 DDIT4Q9NX09 232 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 TIMM13Q9Y5L4 95 aaPredicted RBP12.76□□□□□ -0.37
ABCA3-201ENST00000301732 CCT3P49368 545 aaKnown RBP12.76□□□□□ -0.37
ABCA3-201ENST00000301732 MILR1Q7Z6M3 343 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 FAM131BQ86XD5 332 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 WDR36Q8NI36 951 aaKnown RBP12.76□□□□□ -0.37
ABCA3-201ENST00000301732 ADAM32Q8TC27 787 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 TNIP3Q96KP6 325 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 CCDC167Q9P0B6 97 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 PSMD14O00487 310 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 STAU1O95793 577 aaKnown RBP12.76□□□□□ -0.37
ABCA3-201ENST00000301732 CYP2B6P20813 491 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 TP53BP2Q13625 1128 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 EMC2Q15006 297 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 SUGP1Q8IWZ8 645 aaKnown RBP12.76□□□□□ -0.37
ABCA3-201ENST00000301732 RNFT2Q96EX2 444 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 TSPAN17Q96FV3 270 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 FAM84BQ96KN1 310 aaPredicted RBP12.76□□□□□ -0.37
ABCA3-201ENST00000301732 PAK5Q9P286 719 aa12.76□□□□□ -0.37
ABCA3-201ENST00000301732 CHRNB3Q05901 458 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 CRYMQ14894 314 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 PTPN20Q4JDL3 420 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 ATG14Q6ZNE5 492 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 BTN2A1Q7KYR7 527 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 SLC13A5Q86YT5 568 aaPredicted RBP12.75□□□□□ -0.37
ABCA3-201ENST00000301732 KRT78Q8N1N4 520 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 FGFR1P11362 822 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 MSX2P35548 267 aaPredicted RBP12.75□□□□□ -0.37
ABCA3-201ENST00000301732 TTLL6Q8N841 843 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 SPPL2AQ8TCT8 520 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 ZNF333Q96JL9 665 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 ACO1P21399 889 aaKnown RBP12.75□□□□□ -0.37
ABCA3-201ENST00000301732 ITGA3P26006 1051 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 STARD3Q14849 445 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 VEPH1Q14D04 833 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 COPS4Q9BT78 406 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 C2orf40Q9H1Z8 148 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 TOR4AQ9NXH8 423 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 TRMT6Q9UJA5 497 aaKnown RBP12.75□□□□□ -0.37
ABCA3-201ENST00000301732 RALBP11234 206 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 PDZK1Q5T2W1 519 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 TMED8Q6PL24 325 aaPredicted RBP12.75□□□□□ -0.37
ABCA3-201ENST00000301732 IGDCC4Q8TDY8 1250 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 PMM1Q92871 262 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 FAM167AQ96KS9 214 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 OSGEPL1Q9H4B0 414 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 ACAD9Q9H845 621 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 SH3BP4Q9P0V3 963 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 IGSF1Q8N6C5 1336 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 CFAP43Q8NDM7 1665 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 TRIM24O15164 1050 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 BANF1O75531 89 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 SSTR1P30872 391 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 CRADDP78560 199 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 POU5F1Q01860 360 aaKnown RBP12.75□□□□□ -0.37
ABCA3-201ENST00000301732 ITGA9Q13797 1035 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 KPNB1Q14974 876 aaKnown RBP12.75□□□□□ -0.37
ABCA3-201ENST00000301732 AP5B1Q2VPB7 878 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 KDM7AQ6ZMT4 941 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 FAM228AQ86W67 206 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 CBWD2Q8IUF1 395 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 TINF2Q9BSI4 451 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 KLHL31Q9H511 634 aa12.75□□□□□ -0.37
ABCA3-201ENST00000301732 SAE1Q9UBE0 346 aaPredicted RBP12.75□□□□□ -0.37
ABCA3-201ENST00000301732 MRPS7Q9Y2R9 242 aaKnown RBP12.75□□□□□ -0.37
ABCA3-201ENST00000301732 FDPSP14324 419 aaKnown RBP12.74□□□□□ -0.37
ABCA3-201ENST00000301732 SLC2A4P14672 509 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 ACADSP16219 412 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 CCT8P50990 548 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 FOXO4P98177 505 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 PCDH20Q8N6Y1 951 aaKnown RBP12.74□□□□□ -0.37
ABCA3-201ENST00000301732 RNF145Q96MT1 663 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.74□□□□□ -0.37
ABCA3-201ENST00000301732 DDX3XO00571 662 aaKnown RBP eCLIP12.74□□□□□ -0.371e-12■■■■■ 56.7
ABCA3-201ENST00000301732 CCNT2O60583 730 aaKnown RBP12.74□□□□□ -0.37
ABCA3-201ENST00000301732 USP12O75317 370 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 PON1P27169 355 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 ST8SIA6P61647 398 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 TRADDQ15628 312 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 INAQ16352 499 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 TFAP2DQ7Z6R9 452 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 CARNMT1Q8N4J0 409 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 HPDLQ96IR7 371 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 FICDQ9BVA6 458 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 MYLK2Q9H1R3 596 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 WDCPQ9H6R7 721 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 SYBUQ9NX95 663 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 PDP2Q9P2J9 529 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 TBX3O15119 743 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 ASNA1O43681 348 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 SERPINB9P50453 376 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 MRPS22P82650 360 aaKnown RBP12.74□□□□□ -0.37
ABCA3-201ENST00000301732 PPP1R26Q5T8A7 1209 aaPredicted RBP12.74□□□□□ -0.37
ABCA3-201ENST00000301732 ATF7IP2Q5U623 682 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 ARMC3Q5W041 872 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 MACC1Q6ZN28 852 aa12.74□□□□□ -0.37
ABCA3-201ENST00000301732 RD3Q7Z3Z2 195 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms