RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 WDR35Q9P2L0 1181 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 HEY1Q9Y5J3 304 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 LOC285556D6RIA3 1793 aa13.47□□□□□ -0.25
HIF3A-204ENST00000300862 A0A0G2JLL6 359 aaPredicted RBP13.46□□□□□ -0.25
HIF3A-204ENST00000300862 CBX6O95503 412 aa13.46□□□□□ -0.25
HIF3A-204ENST00000300862 ZNF286BP0CG31 522 aa13.46□□□□□ -0.25
HIF3A-204ENST00000300862 ROR1Q01973 937 aa13.46□□□□□ -0.25
HIF3A-204ENST00000300862 SETDB1Q15047 1291 aa13.46□□□□□ -0.25
HIF3A-204ENST00000300862 AMHR2Q16671 573 aa13.46□□□□□ -0.25
HIF3A-204ENST00000300862 ZC3H12AQ5D1E8 599 aaKnown RBP13.46□□□□□ -0.25
HIF3A-204ENST00000300862 ADGRD1Q6QNK2 874 aa13.46□□□□□ -0.25
HIF3A-204ENST00000300862 ILDR2Q71H61 639 aa13.46□□□□□ -0.25
HIF3A-204ENST00000300862 PRRT2Q7Z6L0 340 aaPredicted RBP13.46□□□□□ -0.25
HIF3A-204ENST00000300862 GPC2Q8N158 579 aa13.46□□□□□ -0.25
HIF3A-204ENST00000300862 PPP1R13LQ8WUF5 828 aa13.46□□□□□ -0.25
HIF3A-204ENST00000300862 UTP4Q969X6 686 aaKnown RBP13.46□□□□□ -0.25
HIF3A-204ENST00000300862 TSPAN16Q9UKR8 245 aa13.46□□□□□ -0.25
HIF3A-204ENST00000300862 PAPPA2Q9BXP8 1791 aa13.46□□□□□ -0.25
HIF3A-204ENST00000300862 KBTBD13C9JR72 458 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 SMNDC1O75940 238 aaKnown RBP eCLIP13.46□□□□□ -0.26
HIF3A-204ENST00000300862 FAM155BO75949 473 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 ZNF143P52747 638 aaPredicted RBP13.46□□□□□ -0.26
HIF3A-204ENST00000300862 YWHAGP61981 247 aaKnown RBP eCLIP13.46□□□□□ -0.26
HIF3A-204ENST00000300862 RNASELQ05823 741 aaKnown RBP13.46□□□□□ -0.26
HIF3A-204ENST00000300862 TTLL12Q14166 644 aaPredicted RBP13.46□□□□□ -0.26
HIF3A-204ENST00000300862 KBTBD12Q3ZCT8 623 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 PLEKHG4Q58EX7 1191 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 SULF1Q8IWU6 871 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 AGGF1Q8N302 714 aaeCLIP13.46□□□□□ -0.26
HIF3A-204ENST00000300862 MZB1Q8WU39 189 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 PTPRN2Q92932 1015 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 LPIN3Q9BQK8 851 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 NGRNQ9NPE2 291 aaKnown RBP13.46□□□□□ -0.26
HIF3A-204ENST00000300862 FAM49BQ9NUQ9 324 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 PRMT7Q9NVM4 692 aaPredicted RBP13.46□□□□□ -0.26
HIF3A-204ENST00000300862 ASNSD1Q9NWL6 643 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 GINS2Q9Y248 185 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 PPME1Q9Y570 386 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 USH1CQ9Y6N9 552 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 NUMBLQ9Y6R0 609 aa13.46□□□□□ -0.26
HIF3A-204ENST00000300862 E7ESA3 106 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 GPD1P21695 349 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 PHKA2P46019 1235 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 TMEM132DQ14C87 1099 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 PRPF39Q86UA1 669 aaKnown RBP13.45□□□□□ -0.26
HIF3A-204ENST00000300862 C10orf82Q8WW14 230 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 SERAC1Q96JX3 654 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 RSAD1Q9HA92 442 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 RAB6BQ9NRW1 208 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 ERAP1Q9NZ08 941 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 DNAJC25-GNG10A0A024R161 153 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 TCRBV9S1A1TA0A576 114 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 C2CD4BA6NLJ0 364 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 VDRP11473 427 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 CCNB1P14635 433 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 GCKP35557 465 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 YARSP54577 528 aaKnown RBP13.45□□□□□ -0.26
HIF3A-204ENST00000300862 FAAP100Q0VG06 881 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 KRT81Q14533 505 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 R3HDM1Q15032 1099 aaKnown RBP13.45□□□□□ -0.26
HIF3A-204ENST00000300862 CA9Q16790 459 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 SCUBE3Q8IX30 993 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 EXOC8Q8IYI6 725 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 RFWD2Q8NHY2 731 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.45□□□□□ -0.26
HIF3A-204ENST00000300862 FAF2Q96CS3 445 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 CFAP36Q96G28 342 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 TRIM56Q9BRZ2 755 aaKnown RBP13.45□□□□□ -0.26
HIF3A-204ENST00000300862 CNPY3Q9BT09 278 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 DHRS4Q9BTZ2 278 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 MAGEB5Q9BZ81 275 aa13.45□□□□□ -0.26
HIF3A-204ENST00000300862 DNAH12Q6ZR08 3092 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 PPEF2O14830 753 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 KCNN4O15554 427 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 PRPSAP2O60256 369 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 SLC25A27O95847 323 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 HMGCRP04035 888 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 PFKMP08237 780 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 ABL2P42684 1182 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 GABRB2P47870 512 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 SLC18A1P54219 525 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 IRX1P78414 480 aaPredicted RBP13.44□□□□□ -0.26
HIF3A-204ENST00000300862 NOMO1Q15155 1222 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 KLHL38Q2WGJ6 581 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 ANKRD20A2Q5SQ80 823 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 ANKRD20A1Q5TYW2 823 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 ANKRD20A3Q5VUR7 823 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 PMF1Q6P1K2 205 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 RGS9BPQ6ZS82 235 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 ZNF276Q8N554 614 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 BANPQ8N9N5 519 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 NLRP7Q8WX94 980 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 DCPSQ96C86 337 aaKnown RBP13.44□□□□□ -0.26
HIF3A-204ENST00000300862 MPHOSPH6Q99547 160 aaKnown RBP13.44□□□□□ -0.26
HIF3A-204ENST00000300862 B3GNT5Q9BYG0 378 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 DPP3Q9NY33 737 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 BARX2Q9UMQ3 279 aaPredicted RBP13.44□□□□□ -0.26
HIF3A-204ENST00000300862 HCRTO43612 131 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 ZWINTO95229 277 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 MT-ND3P03897 115 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms