RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 GPD1P21695 349 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 ELF3P78545 371 aaPredicted RBP15.34■□□□□ 0.05
SCN3B-201ENST00000299333 DENND5BQ6ZUT9 1274 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 RNF149Q8NC42 400 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 ZNF184Q99676 751 aaPredicted RBP15.34■□□□□ 0.05
SCN3B-201ENST00000299333 PHF20Q9BVI0 1012 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 RMND5AQ9H871 391 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 HMG20AQ9NP66 347 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 PCDHB2Q9Y5E7 798 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 RPL10AP62906 217 aaKnown RBP15.34■□□□□ 0.05
SCN3B-201ENST00000299333 AGKQ53H12 422 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 DPY19L2Q6NUT2 758 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 LLGL2Q6P1M3 1020 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 RIPOR1Q6ZS17 1223 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 SYN2Q92777 582 aaPredicted RBP15.34■□□□□ 0.05
SCN3B-201ENST00000299333 MED15Q96RN5 788 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 TSPAN18Q96SJ8 248 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 DYRK4Q9NR20 520 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 BSDC1Q9NW68 430 aaPredicted RBP15.34■□□□□ 0.05
SCN3B-201ENST00000299333 WHRNQ9P202 907 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 PPP1R3GB7ZBB8 358 aa15.33■□□□□ 0.05
SCN3B-201ENST00000299333 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.05
SCN3B-201ENST00000299333 CHI3L1P36222 383 aaPredicted RBP15.33■□□□□ 0.05
SCN3B-201ENST00000299333 ETFBP38117 255 aa15.33■□□□□ 0.05
SCN3B-201ENST00000299333 RGS21Q2M5E4 152 aa15.33■□□□□ 0.05
SCN3B-201ENST00000299333 NAPEPLDQ6IQ20 393 aa15.33■□□□□ 0.05
SCN3B-201ENST00000299333 GPAT2Q6NUI2 795 aa15.33■□□□□ 0.05
SCN3B-201ENST00000299333 HS6ST3Q8IZP7 471 aa15.33■□□□□ 0.05
SCN3B-201ENST00000299333 C10orf53Q8N6V4 93 aa15.33■□□□□ 0.05
SCN3B-201ENST00000299333 CAPN10Q9HC96 672 aa15.33■□□□□ 0.05
SCN3B-201ENST00000299333 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.33■□□□□ 0.05
SCN3B-201ENST00000299333 RNF112Q9ULX5 631 aa15.33■□□□□ 0.05
SCN3B-201ENST00000299333 H7C1W4 665 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 BTN3A3O00478 584 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 IL6P05231 212 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 PRKCBP05771 671 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 EXOSC10Q01780 885 aaKnown RBP15.33■□□□□ 0.04
SCN3B-201ENST00000299333 DDX39BQ13838 428 aaKnown RBP15.33■□□□□ 0.04
SCN3B-201ENST00000299333 PCNX4Q63HM2 1172 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 ARHGAP27Q6ZUM4 889 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 FUKQ8N0W3 1084 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 SVOPQ8N4V2 548 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 MYLK2Q9H1R3 596 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 CHST12Q9NRB3 414 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 GSG1L2A8MUP6 293 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 DPYSL4O14531 572 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 GLI1P08151 1106 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 PDGFRBP09619 1106 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 PKN2Q16513 984 aaKnown RBP15.33■□□□□ 0.04
SCN3B-201ENST00000299333 TRIM74Q86UV6 250 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 TRIM73Q86UV7 250 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 MICALL2Q8IY33 904 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 RNF148Q8N7C7 305 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 C1orf131Q8NDD1 294 aaKnown RBP15.33■□□□□ 0.04
SCN3B-201ENST00000299333 PNMA8CA0A1B0GUJ8 204 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 ATG7O95352 703 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 CBX6O95503 412 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 LGALS3BPQ08380 585 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 DDI2Q5TDH0 399 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 CAVIN3Q969G5 261 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 PI4K2AQ9BTU6 479 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 DGCR6LQ9BY27 220 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 FRMD8Q9BZ67 464 aaPredicted RBP15.33■□□□□ 0.04
SCN3B-201ENST00000299333 SEMA6AQ9H2E6 1030 aa15.33■□□□□ 0.04
SCN3B-201ENST00000299333 CCDC130P13994 396 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 ATF4P18848 351 aaPredicted RBP15.32■□□□□ 0.04
SCN3B-201ENST00000299333 GTF2H1P32780 548 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 ACAP1Q15027 740 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 TAF5Q15542 800 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 PAPD7Q5XG87 772 aaKnown RBP15.32■□□□□ 0.04
SCN3B-201ENST00000299333 C4orf22Q6V702 233 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 UBA3Q8TBC4 463 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 RNF146Q9NTX7 359 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 CYP39A1Q9NYL5 469 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 ZNF624Q9P2J8 865 aaPredicted RBP15.32■□□□□ 0.04
SCN3B-201ENST00000299333 POLG2Q9UHN1 485 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.32■□□□□ 0.04
SCN3B-201ENST00000299333 ASNSP08243 561 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 TWF1Q12792 350 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 EDRF1Q3B7T1 1238 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 DPP10Q8N608 796 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 SLC7A14Q8TBB6 771 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 TFB1MQ8WVM0 346 aaKnown RBP15.32■□□□□ 0.04
SCN3B-201ENST00000299333 CHID1Q9BWS9 393 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 ENTPD7Q9NQZ7 604 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.32■□□□□ 0.04
SCN3B-201ENST00000299333 PRDM4Q9UKN5 801 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 DUSP12Q9UNI6 340 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 FCHO1O14526 889 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 RAD51BO15315 384 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 MAP3K6O95382 1288 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 CPSF4O95639 269 aaKnown RBP15.32■□□□□ 0.04
SCN3B-201ENST00000299333 RGS2P41220 211 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 POLD3Q15054 466 aaPredicted RBP15.32■□□□□ 0.04
SCN3B-201ENST00000299333 TMEM26Q6ZUK4 368 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 EPHX4Q8IUS5 362 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 IARS2Q9NSE4 1012 aaKnown RBP15.32■□□□□ 0.04
SCN3B-201ENST00000299333 A0A087X0T9 212 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 FAM228BP0C875 321 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 MAGEA10P43363 369 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms