RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 SLC29A2Q14542 456 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 SNX17Q15036 470 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 PHKG1Q16816 387 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 SGSM1Q2NKQ1 1148 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 TIMM50Q3ZCQ8 353 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 SV2CQ496J9 727 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 UGT3A1Q6NUS8 523 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 FAM9CQ8IZT9 166 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 MINDY2Q8NBR6 621 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 UBA3Q8TBC4 463 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 PACSIN1Q9BY11 444 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 ACAD9Q9H845 621 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 ATXN10Q9UBB4 475 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 AP3M1Q9Y2T2 418 aa5.75□□□□□ -1.49
CPSF2-201ENST00000298875 FSBPO95073 299 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 FYNP06241 537 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 EFNA5P52803 228 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 NCKAP1LP55160 1127 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 AMHR2Q16671 573 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 ANKS6Q68DC2 871 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 TIPINQ9BVW5 301 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 KCTD10Q9H3F6 313 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 GRID1Q9ULK0 1009 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 EIF3LQ9Y262 564 aaKnown RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 SNX9Q9Y5X1 595 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 ZCCHC18P0CG32 403 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 ALOX15P16050 662 aaPredicted RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 LTKP29376 864 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 HARS2P49590 506 aaKnown RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 ATP12AP54707 1039 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 AQP5P55064 265 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 HLFQ16534 295 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 NANOGNBQ7Z5D8 188 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 ZNF333Q96JL9 665 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 ROGDIQ9GZN7 287 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 DAPK2Q9UIK4 370 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 MED14O60244 1454 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 TRIM49D1C9J1S8 452 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 E9PBE3 544 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 SCTRP47872 440 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 RXRGP48443 463 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 WDR36Q8NI36 951 aaKnown RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 PDS5AQ29RF7 1337 aaKnown RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 INO80Q9ULG1 1556 aaPredicted RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 BCORL1Q5H9F3 1711 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 A0A1B0GTH6 734 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 DNALI1O14645 258 aaPredicted RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 FDX1P10109 184 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 GLRBP48167 497 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 ACADVLP49748 655 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 CLTCL1P53675 1640 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 SPANXN2Q5MJ10 180 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 CYB5D1Q6P9G0 228 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 LINC00523Q86TU6 105 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 CCDC33Q8N5R6 958 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 KCNB2Q92953 911 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 USP13Q92995 863 aaPredicted RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 TP53INP1Q96A56 240 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 C7orf25Q9BPX7 421 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 CATSPERBQ9H7T0 1116 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 FKBP14Q9NWM8 211 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 SETBP1Q9Y6X0 1596 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 TRIM43BA6NCK2 446 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 IL18RAPO95256 599 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 RCAN1P53805 252 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 C2CD6Q53TS8 623 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 CYP4Z1Q86W10 505 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 APOBEC3FQ8IUX4 373 aaKnown RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 CASKIN2Q8WXE0 1202 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 SGF29Q96ES7 293 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 PIF1Q9H611 641 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 SCUBE2Q9NQ36 999 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 WDR37Q9Y2I8 494 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 C15orf41Q9Y2V0 281 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 TMED5Q9Y3A6 229 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 NR5A2O00482 541 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 SKIV2LQ15477 1246 aaKnown RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 SLC44A2Q8IWA5 706 aaPredicted RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 MAGEC3Q8TD91 643 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 UBASH3BQ8TF42 649 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 MINPP1Q9UNW1 487 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 A0A1W2PQJ5 194 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 H3BNX3 289 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 PRRG1O14668 218 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 FDFT1P37268 417 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 ITGA9Q13797 1035 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 RASA2Q15283 850 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 KRT78Q8N1N4 520 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 ZNF512Q96ME7 567 aaPredicted RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 SH2D3AQ9BRG2 576 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 PRRG3Q9BZD7 231 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.74□□□□□ -1.491e-8■■□□□ 12.9
CPSF2-201ENST00000298875 RPS6KB2Q9UBS0 482 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 SQORQ9Y6N5 450 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 CPSF4O95639 269 aaKnown RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 DARSP14868 501 aaKnown RBP5.74□□□□□ -1.49
CPSF2-201ENST00000298875 POU1F1P28069 291 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 IRAK1P51617 712 aa5.74□□□□□ -1.49
CPSF2-201ENST00000298875 KCNB1Q14721 858 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms