RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 BBS12Q6ZW61 710 aa23.82■■□□□ 1.4
VSTM4-201ENST00000298454 RFX6Q8HWS3 928 aa23.82■■□□□ 1.4
VSTM4-201ENST00000298454 SH3TC2Q8TF17 1288 aa23.82■■□□□ 1.4
VSTM4-201ENST00000298454 UBN1Q9NPG3 1134 aa23.82■■□□□ 1.4
VSTM4-201ENST00000298454 GOLGA6CA6NDK9 693 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 GOLGA6DP0CG33 693 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 RABGGTBP53611 331 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 ITGA8P53708 1063 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 HDAC4P56524 1084 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 OASLQ15646 514 aaKnown RBP23.81■■□□□ 1.4
VSTM4-201ENST00000298454 CD300LGQ6UXG3 332 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 LRIG3Q6UXM1 1119 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 CCDC89Q8N998 374 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 ACTL9Q8TC94 416 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 EPB41L4BQ9H329 900 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 RGS18Q9NS28 235 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 GOLGA6AQ9NYA3 693 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.81■■□□□ 1.4
VSTM4-201ENST00000298454 ENDOD1O94919 500 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 ZSCAN5DPP0CG00 497 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 ARSEP51690 589 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 VCPP55072 806 aaKnown RBP23.81■■□□□ 1.4
VSTM4-201ENST00000298454 MAP3K7CLP57077 242 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 SLC8A3P57103 927 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 OTUD4Q01804 1114 aaKnown RBP23.81■■□□□ 1.4
VSTM4-201ENST00000298454 LMNB2Q03252 620 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 TUSC3Q13454 348 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 RHBDF2Q6PJF5 856 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 SLC35B2Q8TB61 432 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 NKD2Q969F2 451 aaPredicted RBP23.81■■□□□ 1.4
VSTM4-201ENST00000298454 PCED1BQ96HM7 432 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 KRT82Q9NSB4 513 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 GPATCH2LQ9NWQ4 482 aa23.81■■□□□ 1.4
VSTM4-201ENST00000298454 ARVCFO00192 962 aa23.8■■□□□ 1.4
VSTM4-201ENST00000298454 ETS1P14921 441 aa23.8■■□□□ 1.4
VSTM4-201ENST00000298454 ATXN1P54253 815 aaKnown RBP23.8■■□□□ 1.4
VSTM4-201ENST00000298454 PLCB3Q01970 1234 aa23.8■■□□□ 1.4
VSTM4-201ENST00000298454 ADCY1Q08828 1119 aa23.8■■□□□ 1.4
VSTM4-201ENST00000298454 ZNF844Q08AG5 666 aa23.8■■□□□ 1.4
VSTM4-201ENST00000298454 ZC3H12AQ5D1E8 599 aaKnown RBP23.8■■□□□ 1.4
VSTM4-201ENST00000298454 UBAP2Q5T6F2 1119 aaKnown RBP23.8■■□□□ 1.4
VSTM4-201ENST00000298454 KCTD16Q68DU8 428 aa23.8■■□□□ 1.4
VSTM4-201ENST00000298454 ALLCQ8N6M5 410 aa23.8■■□□□ 1.4
VSTM4-201ENST00000298454 LINC01599Q8WXQ3 324 aa23.8■■□□□ 1.4
VSTM4-201ENST00000298454 TMEM121Q9BTD3 319 aa23.8■■□□□ 1.4
VSTM4-201ENST00000298454 C11orf84Q9BUA3 381 aaPredicted RBP23.8■■□□□ 1.4
VSTM4-201ENST00000298454 FAM129AQ9BZQ8 928 aa23.8■■□□□ 1.4
VSTM4-201ENST00000298454 DRG1Q9Y295 367 aaKnown RBP23.8■■□□□ 1.4
VSTM4-201ENST00000298454 SCNN1AP37088 669 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 NDUFV1P49821 464 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 DPYSL3Q14195 570 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 RTP3Q9BQQ7 232 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 SEMA4AQ9H3S1 761 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 C10orf88Q9H8K7 445 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 TRIM17Q9Y577 477 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 C9IYK1 514 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 F8W810 466 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 FAM200BP0CF97 657 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 PTPN9P43378 593 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 ARHGEF6Q15052 776 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 SPDYCQ5MJ68 293 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 ARCQ7LC44 396 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 CCDC25Q86WR0 208 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 SNRNP25Q9BV90 132 aaKnown RBP23.79■■□□□ 1.4
VSTM4-201ENST00000298454 PABPC3Q9H361 631 aaKnown RBP23.79■■□□□ 1.4
VSTM4-201ENST00000298454 AAASQ9NRG9 546 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 CDH9Q9ULB4 789 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 PHF24Q9UPV7 400 aa23.79■■□□□ 1.4
VSTM4-201ENST00000298454 MYCP01106 439 aaPredicted RBP23.78■■□□□ 1.4
VSTM4-201ENST00000298454 ITGB1P05556 798 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 ODC1P11926 461 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 CHKAP35790 457 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 CA9Q16790 459 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 BOLA3Q53S33 107 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 FAM35AQ86V20 835 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 SH2D3CQ8N5H7 860 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.78■■□□□ 1.4
VSTM4-201ENST00000298454 LRRC4CQ9HCJ2 640 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 TMEM30AQ9NV96 361 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 ANAPC5Q9UJX4 755 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 ITGAVP06756 1048 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 PECAM1P16284 738 aaPredicted RBP23.78■■□□□ 1.4
VSTM4-201ENST00000298454 DESP17661 470 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 CACNA2D1P54289 1103 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 KRT81Q14533 505 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 IZUMO3Q5VZ72 239 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 SLC24A5Q71RS6 500 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 TTC13Q8NBP0 860 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 KCTD13Q8WZ19 329 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 CENPIQ92674 756 aaPredicted RBP23.78■■□□□ 1.4
VSTM4-201ENST00000298454 DDX23Q9BUQ8 820 aaKnown RBP23.78■■□□□ 1.4
VSTM4-201ENST00000298454 LRRC4Q9HBW1 653 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.78■■□□□ 1.4
VSTM4-201ENST00000298454 CALCOCO1Q9P1Z2 691 aa23.78■■□□□ 1.4
VSTM4-201ENST00000298454 KBTBD13C9JR72 458 aa23.77■■□□□ 1.4
VSTM4-201ENST00000298454 AP1G2O75843 785 aa23.77■■□□□ 1.4
VSTM4-201ENST00000298454 YY1P25490 414 aa23.77■■□□□ 1.4
VSTM4-201ENST00000298454 PRMT2P55345 433 aa23.77■■□□□ 1.4
VSTM4-201ENST00000298454 P3H1Q32P28 736 aa23.77■■□□□ 1.4
VSTM4-201ENST00000298454 EFHC1Q5JVL4 640 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms