RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 ZNF461Q8TAF7 563 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 KRT35Q92764 455 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 PSMB7Q99436 277 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 PLVAPQ9BX97 442 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 RXFP1Q9HBX9 757 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 FNIP2Q9P278 1114 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 RWDD3Q9Y3V2 267 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 GBF1Q92538 1859 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 LAMA2P24043 3122 aaKnown RBP25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 CCDC66A2RUB6 948 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 CES2O00748 559 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 DPYSL4O14531 572 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 ZNF185O15231 689 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 ZBED1O96006 694 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 CCDC14Q49A88 953 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 DAB2IPQ5VWQ8 1189 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 CC2D1AQ6P1N0 951 aaPredicted RBP25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 SCN4BQ8IWT1 228 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 TNS4Q8IZW8 715 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 ALG3Q92685 438 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 CNPY3Q9BT09 278 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 C11orf84Q9BUA3 381 aaPredicted RBP25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 MRPL17Q9NRX2 175 aaKnown RBP25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 LZTS1Q9Y250 596 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 SLC27A5Q9Y2P5 690 aa25.83■■□□□ 1.73
GTF2A1-201ENST00000298173 C5orf67F2Z3F1 127 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 HSF2BPO75031 334 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 USP17L7P0C7H9 530 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 MYOGP15173 224 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 TAS2R40P59535 323 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 YWHAZP63104 245 aaKnown RBP25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 DUSP4Q13115 394 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 RAB33AQ14088 237 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 DDR2Q16832 855 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 TPGS2Q68CL5 300 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 SCAMP5Q8TAC9 235 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 IRGQQ8WZA9 623 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 GDF15Q99988 308 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 DDX23Q9BUQ8 820 aaKnown RBP25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 IL37Q9NZH6 218 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 HSFX1Q9UBD0 423 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 AFF4Q9UHB7 1163 aaKnown RBP25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 GREB1Q4ZG55 1949 aa25.82■■□□□ 1.72
GTF2A1-201ENST00000298173 CEP290O15078 2479 aa25.81■■□□□ 1.72
GTF2A1-201ENST00000298173 KCNK3O14649 394 aa25.81■■□□□ 1.72
GTF2A1-201ENST00000298173 RIOK3O14730 519 aaKnown RBP25.81■■□□□ 1.72
GTF2A1-201ENST00000298173 SART1O43290 800 aaKnown RBP25.81■■□□□ 1.72
GTF2A1-201ENST00000298173 ARHGEF15O94989 841 aa25.81■■□□□ 1.72
GTF2A1-201ENST00000298173 MARCKSL1P49006 195 aa25.81■■□□□ 1.72
GTF2A1-201ENST00000298173 GPR15P49685 360 aa25.81■■□□□ 1.72
GTF2A1-201ENST00000298173 DNA2P51530 1060 aa25.81■■□□□ 1.72
GTF2A1-201ENST00000298173 SLC5A3P53794 718 aa25.81■■□□□ 1.72
GTF2A1-201ENST00000298173 AUTS2Q8WXX7 1259 aa25.81■■□□□ 1.72
GTF2A1-201ENST00000298173 PBKQ96KB5 322 aa25.81■■□□□ 1.72
GTF2A1-201ENST00000298173 SSX2IPQ9Y2D8 614 aa25.81■■□□□ 1.72
GTF2A1-201ENST00000298173 COL4A4P53420 1690 aaPredicted RBP25.81■■□□□ 1.72
GTF2A1-201ENST00000298173 YJEFN3A6XGL0 299 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 E7ENQ6 273 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 LRCH4O75427 683 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 FYNP06241 537 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 WHAMMP3Q1A5X7 153 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 DCAF12L1Q5VU92 463 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 HFE2Q6ZVN8 426 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 UBL4BQ8N7F7 174 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 CENPIQ92674 756 aaPredicted RBP25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 SPATA17Q96L03 361 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 SLC2A13Q96QE2 648 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 USTQ9Y2C2 406 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 ATF2P15336 505 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 CTNNB1P35222 781 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 MATKP42679 507 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 PTPN9P43378 593 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 LRRC38Q5VT99 294 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 NUP93Q8N1F7 819 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 SPPL3Q8TCT6 385 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 NT5C3BQ969T7 300 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 CFAP57Q96MR6 1250 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 C17orf80Q9BSJ5 609 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 CARD9Q9H257 536 aa25.8■■□□□ 1.72
GTF2A1-201ENST00000298173 PSTPIP1O43586 416 aa25.79■■□□□ 1.72
GTF2A1-201ENST00000298173 DAB1O75553 588 aa25.79■■□□□ 1.72
GTF2A1-201ENST00000298173 TCF4P15884 667 aa25.79■■□□□ 1.72
GTF2A1-201ENST00000298173 DNAJB2P25686 324 aa25.79■■□□□ 1.72
GTF2A1-201ENST00000298173 SH3PXD2AQ5TCZ1 1133 aa25.79■■□□□ 1.72
GTF2A1-201ENST00000298173 SDHAF4Q5VUM1 108 aa25.79■■□□□ 1.72
GTF2A1-201ENST00000298173 RHOT1Q8IXI2 618 aa25.79■■□□□ 1.72
GTF2A1-201ENST00000298173 DEFB106AQ8N104 65 aa25.79■■□□□ 1.72
GTF2A1-201ENST00000298173 POPDC2Q9HBU9 364 aa25.79■■□□□ 1.72
GTF2A1-201ENST00000298173 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.79■■□□□ 1.72
GTF2A1-201ENST00000298173 IRAK3Q9Y616 596 aa25.79■■□□□ 1.72
GTF2A1-201ENST00000298173 ZNF638Q14966 1978 aaKnown RBP25.79■■□□□ 1.72
GTF2A1-201ENST00000298173 FAM92AA1XBS5 289 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 TEX28O15482 410 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 SOAT2O75908 522 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 SEC24AO95486 1093 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 RB1P06400 928 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 SDC4P31431 198 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 PCK1P35558 622 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 TUFMP49411 452 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms