RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ZNF484Q5JVG2 852 aa13.94□□□□□ -0.18
HPS3-201ENST00000296051 ARHGAP10A1A4S6 786 aa13.94□□□□□ -0.18
HPS3-201ENST00000296051 RASSF9O75901 435 aa13.94□□□□□ -0.18
HPS3-201ENST00000296051 GNL1P36915 607 aaPredicted RBP13.94□□□□□ -0.18
HPS3-201ENST00000296051 TAF6P49848 677 aa13.94□□□□□ -0.18
HPS3-201ENST00000296051 SLC12A3P55017 1021 aa13.94□□□□□ -0.18
HPS3-201ENST00000296051 MTFR1Q15390 333 aa13.94□□□□□ -0.18
HPS3-201ENST00000296051 SV2CQ496J9 727 aa13.94□□□□□ -0.18
HPS3-201ENST00000296051 ACAD11Q709F0 780 aa13.94□□□□□ -0.18
HPS3-201ENST00000296051 PID1Q7Z2X4 250 aa13.94□□□□□ -0.18
HPS3-201ENST00000296051 C12orf65Q9H3J6 166 aaKnown RBP13.94□□□□□ -0.18
HPS3-201ENST00000296051 TPST1O60507 370 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 FKTNO75072 461 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 PDE5AO76074 875 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 ACO1P21399 889 aaKnown RBP13.93□□□□□ -0.18
HPS3-201ENST00000296051 ACVR2BQ13705 512 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 C10orf120Q5SQS8 335 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 IFNEQ86WN2 208 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 PPIL6Q8IXY8 311 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 MTG1Q9BT17 334 aaPredicted RBP13.93□□□□□ -0.18
HPS3-201ENST00000296051 PIH1D1Q9NWS0 290 aaKnown RBP13.93□□□□□ -0.18
HPS3-201ENST00000296051 PCDHA3Q9Y5H8 950 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 ETS2P15036 469 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 FECHP22830 423 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 GRAMD4Q6IC98 578 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 MFSD7Q6UXD7 560 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 LRRC74BQ6ZQY2 392 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 MIB1Q86YT6 1006 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 CERS5Q8N5B7 392 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 TRAPPC12Q8WVT3 735 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 CENPTQ96BT3 561 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 EPAS1Q99814 870 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 CAAP1Q9H8G2 361 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 DOLKQ9UPQ8 538 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 LRCH1Q9Y2L9 728 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 MYPNQ86TC9 1320 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 GNGT2O14610 69 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 SLITRK3O94933 977 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 EEF1DP29692 281 aaKnown RBP13.93□□□□□ -0.18
HPS3-201ENST00000296051 PEX5P50542 639 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 TMEM132BQ14DG7 1078 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 CRELD2Q6UXH1 353 aaPredicted RBP13.93□□□□□ -0.18
HPS3-201ENST00000296051 B4GALNT2Q8NHY0 566 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 UBA3Q8TBC4 463 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 BCAS3Q9H6U6 928 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 UBQLN1Q9UMX0 589 aaKnown RBP13.93□□□□□ -0.18
HPS3-201ENST00000296051 ARHGAP26Q9UNA1 814 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 TBKBP1A7MCY6 615 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 POMCP01189 267 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 MORF4L2Q15014 288 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 FSCN1Q16658 493 aaKnown RBP13.93□□□□□ -0.18
HPS3-201ENST00000296051 RNF217Q8TC41 542 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 SHISA4Q96DD7 197 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 TRIM62Q9BVG3 475 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 A1CFQ9NQ94 594 aaKnown RBP13.93□□□□□ -0.18
HPS3-201ENST00000296051 FBXO6Q9NRD1 293 aaPredicted RBP13.93□□□□□ -0.18
HPS3-201ENST00000296051 CYP39A1Q9NYL5 469 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.93□□□□□ -0.18
HPS3-201ENST00000296051 PDP2Q9P2J9 529 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 TBX20Q9UMR3 447 aa13.93□□□□□ -0.18
HPS3-201ENST00000296051 GOLGA8QA0A0J9YX86 632 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 GTPBP10A4D1E9 387 aaKnown RBP13.92□□□□□ -0.18
HPS3-201ENST00000296051 GOLGA8OA6NCC3 632 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 GOLGA8NF8WBI6 632 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 NUDT17P0C025 328 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 SLC34A1Q06495 639 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 SH3KBP1Q96B97 665 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 PLEKHA5Q9HAU0 1116 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 PROSCO94903 275 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 CCNG2Q16589 344 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 FASTKD1Q53R41 847 aaKnown RBP13.92□□□□□ -0.18
HPS3-201ENST00000296051 TCHHL1Q5QJ38 904 aaPredicted RBP13.92□□□□□ -0.18
HPS3-201ENST00000296051 SDE2Q6IQ49 451 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 RDM1Q8NG50 284 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 KCTD10Q9H3F6 313 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 C20orf96Q9NUD7 363 aaPredicted RBP13.92□□□□□ -0.18
HPS3-201ENST00000296051 AFF4Q9UHB7 1163 aaKnown RBP13.92□□□□□ -0.18
HPS3-201ENST00000296051 PPME1Q9Y570 386 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 PCDHB12Q9Y5F1 795 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 RICTORQ6R327 1708 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 PIK3CDO00329 1044 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 HOXA2O43364 376 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 ALDH2P05091 517 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 CCL23P55773 120 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 TPI1P60174 286 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 NSUN2Q08J23 767 aaKnown RBP eCLIP13.92□□□□□ -0.18
HPS3-201ENST00000296051 DCAF6Q58WW2 860 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 FKBP1CQ5VVH2 108 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 LRRC8EQ6NSJ5 796 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 TAS2R42Q7RTR8 314 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 EFCAB3Q8N7B9 438 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 EIF1ADQ8N9N8 165 aaKnown RBP13.92□□□□□ -0.18
HPS3-201ENST00000296051 THAP11Q96EK4 314 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 SGF29Q96ES7 293 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 SLC7A5P2Q9GIP4 190 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 MUC3BQ9H195 1237 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 IGFLR1Q9H665 355 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 OLFML3Q9NRN5 406 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 GPATCH2LQ9NWQ4 482 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 HACD3Q9P035 362 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms