RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 ANGEL2Q5VTE6 544 aaKnown RBP13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 PHF13Q86YI8 300 aaPredicted RBP13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 RELL1Q8IUW5 271 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 FAM13CQ8NE31 585 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 AGBL3Q8NEM8 1001 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 SHKBP1Q8TBC3 707 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 P3H4Q92791 437 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 RBM41Q96IZ5 413 aaKnown RBP13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 SERAC1Q96JX3 654 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 SLC13A1Q9BZW2 595 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 CXCL16Q9H2A7 254 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 SMYD3Q9H7B4 428 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 MINDY3Q9H8M7 445 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 DCAF16Q9NXF7 216 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 XPO7Q9UIA9 1087 aaKnown RBP13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 RABGEF1Q9UJ41 708 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 ENO4A6NNW6 628 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 E5RJQ4 531 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 CYB561D2O14569 222 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 KRT3P12035 628 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 BGNP21810 368 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 CLCN3P51790 818 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 BPIFB4P59827 614 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 YWHAGP61981 247 aaKnown RBP eCLIP13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 TREML2Q5T2D2 321 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 KRT77Q7Z794 578 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 RCOR2Q8IZ40 523 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 C12orf29Q8N999 325 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 KCTD6Q8NC69 237 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 SLC7A6OSQ96CW6 309 aaPredicted RBP13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 CGRRF1Q99675 332 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 IL1RAPL1Q9NZN1 696 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 KANSL3Q9P2N6 904 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 LGALS13Q9UHV8 139 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 GINS2Q9Y248 185 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 SSX2IPQ9Y2D8 614 aa13.84□□□□□ -0.19
KCNIP3-201ENST00000295225 COL11A1P12107 1806 aaPredicted RBP13.83□□□□□ -0.19
KCNIP3-201ENST00000295225 ERBB2P04626 1255 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 UBA1P22314 1058 aaKnown RBP13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 TCF7P36402 384 aaPredicted RBP13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 ELK3P41970 407 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 RAD23BP54727 409 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 NR1H3Q13133 447 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 MOGSQ13724 837 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 ZNF699Q32M78 642 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 CWF19L1Q69YN2 538 aaKnown RBP13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 DSTYKQ6XUX3 929 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 PPP1R21Q6ZMI0 780 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 CDHR3Q6ZTQ4 885 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 CENPUQ71F23 418 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 BZW1Q7L1Q6 419 aaKnown RBP13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 ENOSF1Q7L5Y1 443 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 NLRP9Q7RTR0 991 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 ZNF280CQ8ND82 737 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 GPRASP2Q96D09 838 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 SPDL1Q96EA4 605 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 SDCBP2Q9H190 292 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 TUBA8Q9NY65 449 aaPredicted RBP13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 CFAP73A6NFT4 308 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 HCRTO43612 131 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 EDF1O60869 148 aaKnown RBP13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 STAM2O75886 525 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 ARIH2O95376 493 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 IQCF3P0C7M6 154 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 ATP2A2P16615 1042 aaKnown RBP13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 CNGA3Q16281 694 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 CROCCP2Q86T23 111 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 UNC5BQ8IZJ1 945 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 AGGF1Q8N302 714 aaeCLIP13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 FBXO27Q8NI29 283 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 MAIP1Q8WWC4 291 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 MIPEPQ99797 713 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 EBF2Q9HAK2 575 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 NOP53Q9NZM5 478 aaKnown RBP13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 PIM2Q9P1W9 311 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 ACAD8Q9UKU7 415 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 MAGED2Q9UNF1 606 aaPredicted RBP13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 ZNF510Q9Y2H8 683 aa13.83□□□□□ -0.2
KCNIP3-201ENST00000295225 FER1L6Q2WGJ9 1857 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 SGTAO43765 313 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 TYROBPO43914 113 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 B3GALNT1O75752 331 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 CD53P19397 219 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 SERPINB3P29508 390 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 MAN1A1P33908 653 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 PHKA2P46019 1235 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 ATXN1P54253 815 aaKnown RBP13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 FAAP100Q0VG06 881 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 SLC30A9Q6PML9 568 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 C10orf82Q8WW14 230 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 NUDCD1Q96RS6 583 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 C2orf49Q9BVC5 232 aaPredicted RBP13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 DENND2DQ9H6A0 471 aaPredicted RBP13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 ARL8BQ9NVJ2 186 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 HEY2Q9UBP5 337 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 ZFP69BQ9UJL9 534 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 CROTQ9UKG9 612 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 FAM237BA0A1B0GVD1 139 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 MAP3K13O43283 966 aa13.82□□□□□ -0.2
KCNIP3-201ENST00000295225 KDM1AO60341 852 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms