RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 KIAA0895Q8NCT3 520 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 SEPT8Q92599 483 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 PACSIN1Q9BY11 444 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 MTIF3Q9H2K0 278 aaKnown RBP18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 NINJ2Q9NZG7 142 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 PCDHA3Q9Y5H8 950 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 FER1L4A9Z1Z3 1794 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 PYGMP11217 842 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 RPL21P46778 160 aaKnown RBP18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 EPS8Q12929 822 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 DMC1Q14565 340 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 COBLL1Q53SF7 1204 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 GPRC5AQ8NFJ5 357 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 RFWD2Q8NHY2 731 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 RRN3P2A6NIE6 340 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 LSM8O95777 96 aaKnown RBP18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 GYS1P13807 737 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 MMP13P45452 471 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 SESN2P58004 480 aaPredicted RBP18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 TSHZ1Q6ZSZ6 1077 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 IQCKQ8N0W5 287 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 KIF12Q96FN5 646 aa18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 OTUB1Q96FW1 271 aaPredicted RBP18.11■□□□□ 0.49
PCDHA13-201ENST00000289272 IGSF9BQ9UPX0 1349 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 RBP5P82980 135 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 EMC2Q15006 297 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 RNF219Q5W0B1 726 aaPredicted RBP18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 ZCCHC9Q8N567 271 aaKnown RBP18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 DDX50Q9BQ39 737 aaKnown RBP18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 PAIP1Q9H074 479 aaKnown RBP18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 DEFB129Q9H1M3 183 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 GPAMQ9HCL2 828 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 ARHGEF38Q9NXL2 777 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 LMCD1Q9NZU5 365 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 DMTF1Q9Y222 760 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 DNAJC16Q9Y2G8 782 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 HEATR9A2RTY3 570 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 HLA-DRAP01903 254 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 HK2P52789 917 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 DGUOKQ16854 277 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 IER5Q5VY09 327 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 CCDC60Q8IWA6 550 aaPredicted RBP18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 VCPIP1Q96JH7 1222 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 KLF6Q99612 283 aaPredicted RBP18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 ALOX5P09917 674 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 RWDD4Q6NW29 188 aaKnown RBP18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 C9orf16Q9BUW7 83 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 TRIM54Q9BYV2 358 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 SNX13Q9Y5W8 968 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 MPOP05164 745 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 RALBP11234 206 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 IL1R1P14778 569 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 ACADSBP45954 432 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 VEPH1Q14D04 833 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 ANO4Q32M45 955 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 NAPEPLDQ6IQ20 393 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 TMC2Q8TDI7 906 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 DGCR14Q96DF8 476 aaKnown RBP18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 ZNF668Q96K58 619 aaPredicted RBP18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 TMEM237Q96Q45 408 aa18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 C6orf203Q9P0P8 240 aaPredicted RBP18.1■□□□□ 0.49
PCDHA13-201ENST00000289272 EXTL3O43909 919 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 RPLP2P05387 115 aaKnown RBP18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 MAPTP10636 758 aaKnown RBP18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 GPD1P21695 349 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 VCPP55072 806 aaKnown RBP18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 PRKCEQ02156 737 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 FAM83EQ2M2I3 478 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 PTPRN2Q92932 1015 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 PLEKHA5Q9HAU0 1116 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 KLHL11Q9NVR0 708 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 SPDYE2BA6NHP3 402 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 ATMINO43313 823 aaPredicted RBP18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 SPDYE6P0CI01 402 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 CYP2C8P10632 490 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 PDGFRAP16234 1089 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 FASP25445 335 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 HSD17B4P51659 736 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 TOP3AQ13472 1001 aaPredicted RBP18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 RGS21Q2M5E4 152 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 WDR72Q3MJ13 1102 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 TMC5Q6UXY8 1006 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 C3orf67Q6ZVT6 689 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 ERO1BQ86YB8 467 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 FAM162AQ96A26 154 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 GMCL1Q96IK5 515 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 AGBL1Q96MI9 1066 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 NFIBO00712 420 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 HBP1O60381 514 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 RAG1P15918 1043 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 IFI35P80217 286 aaPredicted RBP18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 NSUN2Q08J23 767 aaKnown RBP eCLIP18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 NFIAQ12857 509 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 IYDQ6PHW0 289 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 KYAT3Q6YP21 454 aaKnown RBP18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 SCN4BQ8IWT1 228 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 MED15Q96RN5 788 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 AVENQ9NQS1 362 aaPredicted RBP18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 SLC38A7Q9NVC3 462 aa18.09■□□□□ 0.49
PCDHA13-201ENST00000289272 TRDMT1O14717 391 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms