RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 MRPS21P82921 87 aaKnown RBP14.89□□□□□ -0.03
TPM1-202ENST00000288398 GOLGA8FQ08AF8 430 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 GOLGA8DPQ0D2H9 430 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 RNF43Q68DV7 783 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 ADGRG2Q8IZP9 1017 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 CCDC33Q8N5R6 958 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 USP33Q8TEY7 942 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 TAF4BQ92750 862 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 OTUB2Q96DC9 234 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 PAGE5Q96GU1 130 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 CHAMP1Q96JM3 812 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 SPACA7Q96KW9 195 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 TPSD1Q9BZJ3 242 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 FBXO44Q9H4M3 255 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 VRTNQ9H8Y1 702 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 POLMQ9NP87 494 aaPredicted RBP14.89□□□□□ -0.03
TPM1-202ENST00000288398 ARHGEF4Q9NR80 690 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 COMMD8Q9NX08 183 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 MMP17Q9ULZ9 603 aa14.89□□□□□ -0.03
TPM1-202ENST00000288398 PDXKO00764 312 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 DCLK1O15075 740 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 ZBTB24O43167 697 aaPredicted RBP14.88□□□□□ -0.03
TPM1-202ENST00000288398 MAP3K13O43283 966 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 COCHO43405 550 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 KAT7O95251 611 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 CAVIN2O95810 425 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 GAD2Q05329 585 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 KDSRQ06136 332 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 STK4Q13043 487 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 KMT5BQ4FZB7 885 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 HSF5Q4G112 596 aaPredicted RBP14.88□□□□□ -0.03
TPM1-202ENST00000288398 EOGTQ5NDL2 527 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 STPG1Q5TH74 334 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 ACOT1Q86TX2 421 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 SLC9A9Q8IVB4 645 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 EZH1Q92800 747 aaPredicted RBP14.88□□□□□ -0.03
TPM1-202ENST00000288398 CCDC34Q96HJ3 373 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 SPATA32Q96LK8 384 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 CNTNAP3BQ96NU0 1288 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 KCNK16Q96T55 309 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 CNTNAP3Q9BZ76 1288 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 DUSP15Q9H1R2 295 aaPredicted RBP14.88□□□□□ -0.03
TPM1-202ENST00000288398 CHORDC1Q9UHD1 332 aaPredicted RBP14.88□□□□□ -0.03
TPM1-202ENST00000288398 RCOR1Q9UKL0 485 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 INVSQ9Y283 1065 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 NME7Q9Y5B8 376 aa14.88□□□□□ -0.03
TPM1-202ENST00000288398 HELZP42694 1942 aaKnown RBP14.88□□□□□ -0.03
TPM1-202ENST00000288398 DNAH14Q0VDD8 3507 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 A0A1B0GVL5 298 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 TBC1D3BA6NDS4 549 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 K7EQS6 105 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 KLF8O95600 359 aaPredicted RBP14.87□□□□□ -0.03
TPM1-202ENST00000288398 C4BPAP04003 597 aaKnown RBP14.87□□□□□ -0.03
TPM1-202ENST00000288398 FAM200BP0CF97 657 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 IRF1P10914 325 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 KRT13P13646 458 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 PFKFB1P16118 471 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 TIE1P35590 1138 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 GRIA2P42262 883 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 TUBP50607 506 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 KRT85P78386 507 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 ZXDBP98169 803 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 BYSLQ13895 437 aaKnown RBP14.87□□□□□ -0.03
TPM1-202ENST00000288398 CRY1Q16526 586 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 ANO4Q32M45 955 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 CYP2U1Q7Z449 544 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 TRMT11Q7Z4G4 463 aaKnown RBP14.87□□□□□ -0.03
TPM1-202ENST00000288398 UNC93AQ86WB7 457 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 PGBD3Q8N328 593 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 ALLCQ8N6M5 410 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 TXNDC5Q8NBS9 432 aaKnown RBP14.87□□□□□ -0.03
TPM1-202ENST00000288398 KIAA0895Q8NCT3 520 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 SCAMP5Q8TAC9 235 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 TMC2Q8TDI7 906 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 WHAMMQ8TF30 809 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 CNOT6LQ96LI5 555 aaKnown RBP14.87□□□□□ -0.03
TPM1-202ENST00000288398 EDEM2Q9BV94 578 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 SMOC1Q9H4F8 434 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 TLR8Q9NR97 1041 aaKnown RBP14.87□□□□□ -0.03
TPM1-202ENST00000288398 GMIPQ9P107 970 aa14.87□□□□□ -0.03
TPM1-202ENST00000288398 LSM7Q9UK45 103 aaKnown RBP14.87□□□□□ -0.03
TPM1-202ENST00000288398 ANAPC1Q9H1A4 1944 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 IKBKBO14920 756 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 ACTN4O43707 911 aaKnown RBP14.86□□□□□ -0.03
TPM1-202ENST00000288398 CCDC130P13994 396 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 CMA1P23946 247 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 RPL13P26373 211 aaKnown RBP14.86□□□□□ -0.03
TPM1-202ENST00000288398 ADORA2BP29275 332 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 SYKP43405 635 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 TNFRSF4P43489 277 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 DHPSP49366 369 aaPredicted RBP14.86□□□□□ -0.03
TPM1-202ENST00000288398 NDST1P52848 882 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 MAP3K7CLP57077 242 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 CLDN10P78369 228 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 ZACNQ401N2 412 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 PLA2G2CQ5R387 149 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 LY6G5CQ5SRR4 150 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 DAB2IPQ5VWQ8 1189 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 RHBDF2Q6PJF5 856 aa14.86□□□□□ -0.03
TPM1-202ENST00000288398 PLEKHO2Q8TD55 490 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms