RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 GPR15P49685 360 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 SLC5A3P53794 718 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 RPL10AP62906 217 aaKnown RBP19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 MRPS5P82675 430 aaKnown RBP19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 PLPP4Q5VZY2 271 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 SLFN11Q7Z7L1 901 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 DAAM2Q86T65 1068 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 SYCE1Q8N0S2 351 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 BTBD6Q96KE9 485 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 ULBP1Q9BZM6 244 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 PRO3102Q9H379 93 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 SLC28A3Q9HAS3 691 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 TMEM59LQ9UK28 342 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 USP3Q9Y6I4 520 aa19.86■□□□□ 0.77
PDLIM3-202ENST00000284770 HIDE1A8MVS5 230 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 SOAT2O75908 522 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 SEC24AO95486 1093 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 ZBED1O96006 694 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 ADH1AP07327 375 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 EFHC1Q5JVL4 640 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 SDHAF4Q5VUM1 108 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 PM20D1Q6GTS8 502 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 C11orf63Q6NUN7 778 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 SLC26A9Q7LBE3 791 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 NUP93Q8N1F7 819 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 SCML4Q8N228 414 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 MICAL1Q8TDZ2 1067 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 KHSRPQ92945 711 aaKnown RBP eCLIP19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 SPATA17Q96L03 361 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 CEP295NLQ96MC4 621 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 CERS4Q9HA82 394 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 MRFAP1Q9Y605 127 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 TNRC18O15417 2968 aaPredicted RBP19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 SART1O43290 800 aaKnown RBP19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 USP17L7P0C7H9 530 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 DAOAP59103 153 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 MESDQ14696 234 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 TAF5Q15542 800 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 PDE12Q6L8Q7 609 aaKnown RBP19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 CHRDL2Q6WN34 429 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 ARCQ7LC44 396 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 TCEAL8Q8IYN2 117 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 JOSD2Q8TAC2 188 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 SCAMP5Q8TAC9 235 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 TLR10Q9BXR5 811 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 CYP4F11Q9HBI6 524 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 LCMT1Q9UIC8 334 aa19.85■□□□□ 0.77
PDLIM3-202ENST00000284770 TGM5O43548 720 aa19.84■□□□□ 0.77
PDLIM3-202ENST00000284770 LPXNO60711 386 aa19.84■□□□□ 0.77
PDLIM3-202ENST00000284770 ELF1P32519 619 aa19.84■□□□□ 0.77
PDLIM3-202ENST00000284770 IRS1P35568 1242 aa19.84■□□□□ 0.77
PDLIM3-202ENST00000284770 RNASE9P60153 205 aaKnown RBP19.84■□□□□ 0.77
PDLIM3-202ENST00000284770 SMAD3P84022 425 aaKnown RBP19.84■□□□□ 0.77
PDLIM3-202ENST00000284770 MEI1Q5TIA1 1274 aa19.84■□□□□ 0.77
PDLIM3-202ENST00000284770 FNIP1Q8TF40 1166 aa19.84■□□□□ 0.77
PDLIM3-202ENST00000284770 NDRG1Q92597 394 aaKnown RBP19.84■□□□□ 0.77
PDLIM3-202ENST00000284770 GOLPH3Q9H4A6 298 aa19.84■□□□□ 0.77
PDLIM3-202ENST00000284770 ASNSD1Q9NWL6 643 aa19.84■□□□□ 0.77
PDLIM3-202ENST00000284770 IP6K2Q9UHH9 426 aa19.84■□□□□ 0.77
PDLIM3-202ENST00000284770 GRAP2O75791 330 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 CSPG5O95196 566 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 FTCDO95954 541 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 GLI1P08151 1106 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 ATF6P18850 670 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 KLRC2P26717 231 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 LILRA6Q6PI73 481 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 DENND5BQ6ZUT9 1274 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 EMC1Q8N766 993 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 GPR152Q8TDT2 470 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 ARNTL2Q8WYA1 636 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 IRGQQ8WZA9 623 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 FBXO44Q9H4M3 255 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 IL37Q9NZH6 218 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 ALG6Q9Y672 507 aa19.83■□□□□ 0.77
PDLIM3-202ENST00000284770 C2CD4BA6NLJ0 364 aa19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 NCK2O43639 380 aa19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 HSF2BPO75031 334 aa19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 PROSCO94903 275 aa19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 FLT3P36888 993 aa19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 YWHAZP63104 245 aaKnown RBP19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 OGDHQ02218 1023 aa19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 TUBB2AQ13885 445 aa19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 TIFAQ96CG3 184 aa19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 TUBB2BQ9BVA1 445 aa19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 COMMD8Q9NX08 183 aa19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 CDC23Q9UJX2 597 aa19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 SNX12Q9UMY4 172 aa19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 SAR1BQ9Y6B6 198 aa19.83■□□□□ 0.76
PDLIM3-202ENST00000284770 PATJQ8NI35 1801 aa19.82■□□□□ 0.76
PDLIM3-202ENST00000284770 YJEFN3A6XGL0 299 aa19.82■□□□□ 0.76
PDLIM3-202ENST00000284770 TMEM110-MUSTN1A8MSY1 372 aa19.82■□□□□ 0.76
PDLIM3-202ENST00000284770 E7ENQ6 273 aa19.82■□□□□ 0.76
PDLIM3-202ENST00000284770 PRRG1O14668 218 aa19.82■□□□□ 0.76
PDLIM3-202ENST00000284770 RTN3O95197 1032 aaPredicted RBP19.82■□□□□ 0.76
PDLIM3-202ENST00000284770 ALDH1A3P47895 512 aa19.82■□□□□ 0.76
PDLIM3-202ENST00000284770 ZNF252P-AS1Q0IIN9 211 aa19.82■□□□□ 0.76
PDLIM3-202ENST00000284770 PIGHQ14442 188 aaPredicted RBP19.82■□□□□ 0.76
PDLIM3-202ENST00000284770 BHLHA9Q7RTU4 235 aa19.82■□□□□ 0.76
PDLIM3-202ENST00000284770 FAM149B1Q96BN6 582 aa19.82■□□□□ 0.76
PDLIM3-202ENST00000284770 YIPF1Q9Y548 306 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms