RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 GABRQQ9UN88 632 aa19.15■□□□□ 0.66
PDLIM3-201ENST00000284767 TCRBV5S1A1TA0A578 114 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 F8VP50 259 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 EDF1O60869 148 aaKnown RBP19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 PEX11AO75192 247 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 CILPO75339 1184 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 EIF4BP23588 611 aaKnown RBP19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 CALRP27797 417 aaKnown RBP19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 CPT1AP50416 773 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 SLC27A1Q6PCB7 646 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 ACSF2Q96CM8 615 aaPredicted RBP19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 OSBPL8Q9BZF1 889 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 RNF39Q9H2S5 420 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 TRABDQ9H4I3 376 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 PPCSQ9HAB8 311 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 PIN4Q9Y237 131 aaKnown RBP19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 TARSP26639 723 aaKnown RBP19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 GCAP28676 217 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 CAP1Q01518 475 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 TRIM32Q13049 653 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 SNX17Q15036 470 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 WASHC2DQ5SRD0 308 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 CYP4F22Q6NT55 531 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 ENDOVQ8N8Q3 282 aaKnown RBP19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 NKX1-2Q9UD57 310 aaPredicted RBP19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 HAO1Q9UJM8 370 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 PCDHGC3Q9UN70 934 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 C2CD2Q9Y426 696 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 SCINQ9Y6U3 715 aa19.14■□□□□ 0.65
PDLIM3-201ENST00000284767 A6NHS1 94 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 PIK3R2O00459 728 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 TRAFD1O14545 582 aaPredicted RBP19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 PTPN11Q06124 597 aaPredicted RBP19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 P3H1Q32P28 736 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 TXNRD3NBQ6F5E7 133 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 DNAJC24Q6P3W2 148 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 EXD1Q8NHP7 514 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 LRRC8CQ8TDW0 803 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 SMC6Q96SB8 1091 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 CPXM1Q96SM3 734 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 TMEM191CA6NGB0 347 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 SPAG7O75391 227 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 LSM8O95777 96 aaKnown RBP19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 PGK1P00558 417 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 IGHA2P01877 340 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 ABL2P42684 1182 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 CCNHP51946 323 aaPredicted RBP19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 NDST1P52848 882 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 PURAQ00577 322 aaKnown RBP19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 GSTA5Q7RTV2 222 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 C12orf29Q8N999 325 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 FAM13CQ8NE31 585 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 UBA3Q8TBC4 463 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 KCNV2Q8TDN2 545 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 TMEM176AQ96HP8 235 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 SAYSD1Q9NPB0 183 aa19.13■□□□□ 0.65
PDLIM3-201ENST00000284767 PI4K2BG5E9Z4 385 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 RECQL4O94761 1208 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 TPBGLP0DKB5 382 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 RASA2Q15283 850 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 NOTUMQ6P988 496 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 DCUN1D2Q6PH85 259 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 PRUNE1Q86TP1 453 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 C10orf82Q8WW14 230 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 TRIB2Q92519 343 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 SLC7A6OSQ96CW6 309 aaPredicted RBP19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 SNX27Q96L92 541 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 HEXIM2Q96MH2 286 aaKnown RBP19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 ITGA11Q9UKX5 1188 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 DNALI1O14645 258 aaPredicted RBP19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 HCRTO43612 131 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 HNRNPCL1O60812 293 aaKnown RBP19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 MYCNP04198 464 aaPredicted RBP19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 CALB1P05937 261 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 CDC25CP30307 473 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 CDH5P33151 784 aaPredicted RBP19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 YWHAEP62258 255 aaKnown RBP19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 RBP5P82980 135 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 DCAF4L1Q3SXM0 396 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 CXCL17Q6UXB2 119 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 JOSD2Q8TAC2 188 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 SOCS4Q8WXH5 440 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 TBC1D10AQ9BXI6 508 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 ZFATQ9P243 1243 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 SNX9Q9Y5X1 595 aa19.12■□□□□ 0.65
PDLIM3-201ENST00000284767 C17orf102A2RUQ5 167 aa19.11■□□□□ 0.65
PDLIM3-201ENST00000284767 MICAL2O94851 1124 aa19.11■□□□□ 0.65
PDLIM3-201ENST00000284767 T-ENOLP0DO92 83 aa19.11■□□□□ 0.65
PDLIM3-201ENST00000284767 CYP3A5P20815 502 aa19.11■□□□□ 0.65
PDLIM3-201ENST00000284767 ATICP31939 592 aa19.11■□□□□ 0.65
PDLIM3-201ENST00000284767 EMC1Q8N766 993 aa19.11■□□□□ 0.65
PDLIM3-201ENST00000284767 C7orf31Q8N865 590 aa19.11■□□□□ 0.65
PDLIM3-201ENST00000284767 CFAP61Q8NHU2 1237 aa19.11■□□□□ 0.65
PDLIM3-201ENST00000284767 LPIN3Q9BQK8 851 aa19.11■□□□□ 0.65
PDLIM3-201ENST00000284767 VRTNQ9H8Y1 702 aa19.11■□□□□ 0.65
PDLIM3-201ENST00000284767 GOLGA2P5Q9HBQ8 144 aa19.11■□□□□ 0.65
PDLIM3-201ENST00000284767 NME7Q9Y5B8 376 aa19.11■□□□□ 0.65
PDLIM3-201ENST00000284767 TLL2Q9Y6L7 1015 aa19.11■□□□□ 0.65
PDLIM3-201ENST00000284767 M0QYV0 167 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms