RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 ADCK2Q7Z695 626 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 ADGRG6Q86SQ4 1221 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 RTKN2Q8IZC4 609 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 GALNT6Q8NCL4 622 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 USP6NLQ92738 828 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 KCNN1Q92952 543 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 FAM118BQ9BPY3 351 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 PDCD2LQ9BRP1 358 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 EDEM3Q9BZQ6 932 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 CCDC134Q9H6E4 229 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 NECTIN3Q9NQS3 549 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 STK32BQ9NY57 414 aa2.94□□□□□ -1.94
CHD1-201ENST00000284049 KCNJ18B7U540 433 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 F8W8V4 182 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 NTRK1P04629 796 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 BUD31P41223 144 aaPredicted RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 COPAP53621 1224 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 UCP3P55916 312 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SCARB2Q14108 478 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 FRG1Q14331 258 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 KCNJ12Q14500 433 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 GPR162Q16538 588 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 PARP10Q53GL7 1025 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 PRAMEF14Q5SWL7 426 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ALKBH5Q6P6C2 394 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 RGS9BPQ6ZS82 235 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 NSMCE1Q8WV22 266 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 RMDN1Q96DB5 314 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ERLEC1Q96DZ1 483 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 PABPC3Q9H361 631 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 SEMA4AQ9H3S1 761 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 VPS37BQ9H9H4 285 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SENP2Q9HC62 589 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 EPS15L1Q9UBC2 864 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 NRKQ7Z2Y5 1582 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 E7EVH7 732 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 GDF9O60383 454 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SELPP16109 830 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 CTSKP43235 329 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 PTDSS1P48651 473 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 RBP5P82980 135 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 CYP4F8P98187 520 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 MOGSQ13724 837 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 GRAMD4Q6IC98 578 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 KLHL10Q6JEL2 608 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 TTI2Q6NXR4 508 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 USP17L6PQ6QN14 398 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 RNF111Q6ZNA4 994 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SMG8Q8ND04 991 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 KRT35Q92764 455 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 NMD3Q96D46 503 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 HES6Q96HZ4 224 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 FCRL2Q96LA5 508 aaPredicted RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 RANBP17Q9H2T7 1088 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 RXFP1Q9HBX9 757 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 IMPACTQ9P2X3 320 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 FBXL7Q9UJT9 491 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ZMYND8Q9ULU4 1186 aaPredicted RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 PCDHB1Q9Y5F3 818 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ADAMTS13Q76LX8 1427 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 TRIM43BA6NCK2 446 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 STX16-NPEPL1H3BU86 382 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 STX16O14662 325 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 STX6O43752 255 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 MT-ND3P03897 115 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ANXA1P04083 346 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ALAS1P13196 640 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 RING1Q06587 406 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ARHGEF7Q14155 803 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 PLA1AQ53H76 456 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 CCDC178Q5BJE1 867 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 CYP20A1Q6UW02 462 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 LRSAM1Q6UWE0 723 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.93□□□□□ -1.94
CHD1-201ENST00000284049 TRIM43Q96BQ3 446 aaPredicted RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 AKTIPQ9H8T0 292 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 CYP4F11Q9HBI6 524 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ERVK-5Q9HDB9 667 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 USP22Q9UPT9 525 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 KNSTRNQ9Y448 316 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 TELO2Q9Y4R8 837 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 NALCNQ8IZF0 1738 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ARHGEF28Q8N1W1 1705 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 SLC27A2O14975 620 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 KIAA0754O94854 1291 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 MSL3P1P0C860 447 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 CYP2C9P11712 490 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 NEFHP12036 1026 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 XRCC6P12956 609 aaKnown RBP eCLIP2.93□□□□□ -1.94
CHD1-201ENST00000284049 ARF4P18085 180 aaPredicted RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 TLX1P31314 330 aaPredicted RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 PXNP49023 591 aaPredicted RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 MECP2P51608 486 aaKnown RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 TKTL1P51854 596 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 FSTL1Q12841 308 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 TPD52L1Q16890 204 aaPredicted RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 ZNF568Q3ZCX4 644 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 ANKDD1AQ495B1 522 aa2.93□□□□□ -1.94
CHD1-201ENST00000284049 SETMARQ53H47 684 aaPredicted RBP2.93□□□□□ -1.94
CHD1-201ENST00000284049 ZBTB41Q5SVQ8 909 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms