RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 PLEKHA7Q6IQ23 1121 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.83□□□□□ -0.52
SCLT1-201ENST00000281142 FEZF2Q8TBJ5 459 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 MFSD14AQ96MC6 490 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 MCEEQ96PE7 176 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 R3HDMLQ9H3Y0 253 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 ACSS3Q9H6R3 686 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 SHOC2Q9UQ13 582 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 CTDP1Q9Y5B0 961 aaPredicted RBP11.83□□□□□ -0.52
SCLT1-201ENST00000281142 PCDHB4Q9Y5E5 795 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 hCG_1818297A0A087WSY0 165 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 CYB561D2O14569 222 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 ATP2A1O14983 1001 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 HLA-DRAP01903 254 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 SETSIPP0DME0 302 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 MAPTP10636 758 aaKnown RBP11.83□□□□□ -0.52
SCLT1-201ENST00000281142 GRIA2P42262 883 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 QARSP47897 775 aaKnown RBP11.83□□□□□ -0.52
SCLT1-201ENST00000281142 LMNB2Q03252 620 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 Q3C1V9 767 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 KCNT1Q5JUK3 1230 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
SCLT1-201ENST00000281142 PALM2Q8IXS6 379 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 ATP11CQ8NB49 1132 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 SPATA16Q9BXB7 569 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 HOMER2Q9NSB8 354 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 PDP2Q9P2J9 529 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 ZNF232Q9UNY5 417 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 THSD7BQ9C0I4 1608 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 A6NJR5 290 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 TM9SF1O15321 606 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 DHRS4L1P0CG22 281 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 ACO1P21399 889 aaKnown RBP11.83□□□□□ -0.52
SCLT1-201ENST00000281142 GNA15P30679 374 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 CCNFP41002 786 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 DSG1Q02413 1049 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 PTK7Q13308 1070 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 KRT72Q14CN4 511 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 CFAP157Q5JU67 520 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 TDRD10Q5VZ19 366 aaKnown RBP11.83□□□□□ -0.52
SCLT1-201ENST00000281142 RNF111Q6ZNA4 994 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 SESTD1Q86VW0 696 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 ARID3BQ8IVW6 561 aaPredicted RBP11.83□□□□□ -0.52
SCLT1-201ENST00000281142 SCUBE1Q8IWY4 988 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 ULK2Q8IYT8 1036 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 RCOR2Q8IZ40 523 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 USP6NLQ92738 828 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 SSU72Q9NP77 194 aaKnown RBP11.83□□□□□ -0.52
SCLT1-201ENST00000281142 PLA2G4CQ9UP65 541 aa11.83□□□□□ -0.52
SCLT1-201ENST00000281142 ATP6V1G1O75348 118 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 AVILO75366 819 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 RPL22P35268 128 aaKnown RBP11.82□□□□□ -0.52
SCLT1-201ENST00000281142 OAZ1P54368 228 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 ALDH18A1P54886 795 aaKnown RBP11.82□□□□□ -0.52
SCLT1-201ENST00000281142 OTUD4Q01804 1114 aaKnown RBP11.82□□□□□ -0.52
SCLT1-201ENST00000281142 MTA1Q13330 715 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 UBAP2LQ14157 1087 aaKnown RBP11.82□□□□□ -0.52
SCLT1-201ENST00000281142 KBTBD12Q3ZCT8 623 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 BRDTQ58F21 947 aaPredicted RBP11.82□□□□□ -0.52
SCLT1-201ENST00000281142 CEP128Q6ZU80 1094 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 PRPF39Q86UA1 669 aaKnown RBP11.82□□□□□ -0.52
SCLT1-201ENST00000281142 MYLK4Q86YV6 388 aaPredicted RBP11.82□□□□□ -0.52
SCLT1-201ENST00000281142 MAP4K3Q8IVH8 894 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 ABRAQ8N0Z2 381 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 GSTCDQ8NEC7 633 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 CCDC110Q8TBZ0 833 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 ACTL9Q8TC94 416 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 TMEM174Q8WUU8 243 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 PYDC1Q8WXC3 89 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 TRIM11Q96F44 468 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 ACAP3Q96P50 834 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 PARK7Q99497 189 aaKnown RBP11.82□□□□□ -0.52
SCLT1-201ENST00000281142 SENP7Q9BQF6 1050 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 C20orf27Q9GZN8 174 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 FAM192AQ9GZU8 254 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 PCDH9Q9HC56 1237 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 DDX43Q9NXZ2 648 aaKnown RBP11.82□□□□□ -0.52
SCLT1-201ENST00000281142 CAPN14A8MX76 684 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 HNRNPDLO14979 420 aaKnown RBP11.82□□□□□ -0.52
SCLT1-201ENST00000281142 OR6B1O95007 311 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 MAGEA10P43363 369 aaPredicted RBP11.82□□□□□ -0.52
SCLT1-201ENST00000281142 ACOT2P49753 483 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 RAP1GDS1P52306 607 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 INHBCP55103 352 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 ZRSR2Q15696 482 aaKnown RBP11.82□□□□□ -0.52
SCLT1-201ENST00000281142 LPCAT4Q643R3 524 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 UNC45BQ8IWX7 931 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 NAT8LQ8N9F0 302 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 TMC2Q8TDI7 906 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 NCSTNQ92542 709 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 RIT2Q99578 217 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 TEX13BQ9BXU2 312 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 SPATC1LQ9H0A9 340 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 MRPL47Q9HD33 250 aaKnown RBP11.82□□□□□ -0.52
SCLT1-201ENST00000281142 KMT5AQ9NQR1 393 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 NDE1Q9NXR1 346 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 ANGPTL2Q9UKU9 493 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 TELO2Q9Y4R8 837 aa11.82□□□□□ -0.52
SCLT1-201ENST00000281142 ADGRA2Q96PE1 1338 aa11.81□□□□□ -0.52
SCLT1-201ENST00000281142 PRR5-ARHGAP8B1AHC4 643 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms