RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 CYFIP2Q96F07 1278 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 VCPIP1Q96JH7 1222 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 PDCL3Q9H2J4 239 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 UVRAGQ9P2Y5 699 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 DSEQ9UL01 958 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 MAFFQ9ULX9 164 aa25.95■■□□□ 1.74
SSBP4-201ENST00000270061 CTAGE15A4D2H0 777 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 CTAGE8P0CG41 777 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 COL9A1P20849 921 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 FSHRP23945 695 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 NOMO3P69849 1222 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 SIGLEC14Q08ET2 396 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 CTAGE6Q86UF2 777 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 CTAGE4Q8IX94 777 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 MCOLN2Q8IZK6 566 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 GOLGA1Q92805 767 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 MYADMQ96S97 322 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 SDCBP2Q9H190 292 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 AVENQ9NQS1 362 aaPredicted RBP25.94■■□□□ 1.74
SSBP4-201ENST00000270061 RNF14Q9UBS8 474 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 PCDHGC3Q9UN70 934 aa25.94■■□□□ 1.74
SSBP4-201ENST00000270061 KPNA7A9QM74 516 aa25.93■■□□□ 1.74
SSBP4-201ENST00000270061 CES2O00748 559 aa25.93■■□□□ 1.74
SSBP4-201ENST00000270061 CYB561D2O14569 222 aa25.93■■□□□ 1.74
SSBP4-201ENST00000270061 BUB1BO60566 1050 aaPredicted RBP25.93■■□□□ 1.74
SSBP4-201ENST00000270061 SEC24AO95486 1093 aa25.93■■□□□ 1.74
SSBP4-201ENST00000270061 CYP11A1P05108 521 aa25.93■■□□□ 1.74
SSBP4-201ENST00000270061 NTHL1P78549 312 aa25.93■■□□□ 1.74
SSBP4-201ENST00000270061 ERCC6LQ2NKX8 1250 aa25.93■■□□□ 1.74
SSBP4-201ENST00000270061 RNF19BQ6ZMZ0 732 aa25.93■■□□□ 1.74
SSBP4-201ENST00000270061 DAAM2Q86T65 1068 aa25.93■■□□□ 1.74
SSBP4-201ENST00000270061 UBALD2Q8IYN6 164 aa25.93■■□□□ 1.74
SSBP4-201ENST00000270061 CTTNBP2NLQ9P2B4 639 aa25.93■■□□□ 1.74
SSBP4-201ENST00000270061 EPS15L1Q9UBC2 864 aa25.93■■□□□ 1.74
SSBP4-201ENST00000270061 INSL5Q9Y5Q6 135 aa25.93■■□□□ 1.74
SSBP4-201ENST00000270061 CILPO75339 1184 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 LSM8O95777 96 aaKnown RBP25.92■■□□□ 1.74
SSBP4-201ENST00000270061 NSFP46459 744 aaKnown RBP25.92■■□□□ 1.74
SSBP4-201ENST00000270061 RPS6KA1Q15418 735 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 ZNF572Q7Z3I7 529 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-201ENST00000270061 NT5DC3Q86UY8 548 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 METTL23Q86XA0 190 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 PHF13Q86YI8 300 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-201ENST00000270061 ANKRD7Q92527 254 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 ZNF653Q96CK0 615 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 SMYD3Q9H7B4 428 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 HCFC1R1Q9NWW0 138 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 ZNF185O15231 689 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 OR4Q2P0C623 313 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 CDH8P55286 799 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 TNNC1P63316 161 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 INCA1Q0VD86 236 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 PABPC1LQ4VXU2 614 aaKnown RBP25.92■■□□□ 1.74
SSBP4-201ENST00000270061 NAA35Q5VZE5 725 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 C11orf63Q6NUN7 778 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 PEX26Q7Z412 305 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 WHAMMQ8TF30 809 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 COG1Q8WTW3 980 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 ZNF518BQ9C0D4 1074 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 KCNK12Q9HB15 430 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 IGSF9Q9P2J2 1179 aa25.92■■□□□ 1.74
SSBP4-201ENST00000270061 DNMT3BQ9UBC3 853 aaKnown RBP25.92■■□□□ 1.74
SSBP4-201ENST00000270061 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.92■■□□□ 1.74
SSBP4-201ENST00000270061 V9GYY5 206 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-201ENST00000270061 WDFY4Q6ZS81 3184 aa25.91■■□□□ 1.74
SSBP4-201ENST00000270061 TMEM221A6NGB7 291 aa25.91■■□□□ 1.74
SSBP4-201ENST00000270061 M0R296 226 aa25.91■■□□□ 1.74
SSBP4-201ENST00000270061 CFHP08603 1231 aa25.91■■□□□ 1.74
SSBP4-201ENST00000270061 LAMP2P13473 410 aa25.91■■□□□ 1.74
SSBP4-201ENST00000270061 CDH5P33151 784 aaPredicted RBP25.91■■□□□ 1.74
SSBP4-201ENST00000270061 RAP1GAPP47736 663 aa25.91■■□□□ 1.74
SSBP4-201ENST00000270061 RAD23BP54727 409 aa25.91■■□□□ 1.74
SSBP4-201ENST00000270061 GPR17Q13304 367 aa25.91■■□□□ 1.74
SSBP4-201ENST00000270061 HFE2Q6ZVN8 426 aa25.91■■□□□ 1.74
SSBP4-201ENST00000270061 MON1BQ7L1V2 547 aa25.91■■□□□ 1.74
SSBP4-201ENST00000270061 CPA5Q8WXQ8 436 aa25.91■■□□□ 1.74
SSBP4-201ENST00000270061 AMFRQ9UKV5 643 aa25.91■■□□□ 1.74
SSBP4-201ENST00000270061 ZFP37Q9Y6Q3 630 aaPredicted RBP25.91■■□□□ 1.74
SSBP4-201ENST00000270061 ZNF394Q53GI3 561 aa25.9■■□□□ 1.74
SSBP4-201ENST00000270061 PGLYRP2Q96PD5 576 aa25.9■■□□□ 1.74
SSBP4-201ENST00000270061 MMS19Q96T76 1030 aa25.9■■□□□ 1.74
SSBP4-201ENST00000270061 ZSWIM1Q9BR11 485 aa25.9■■□□□ 1.74
SSBP4-201ENST00000270061 CNOT8Q9UFF9 292 aaKnown RBP25.9■■□□□ 1.74
SSBP4-201ENST00000270061 ZNF318Q5VUA4 2279 aa25.9■■□□□ 1.74
SSBP4-201ENST00000270061 MED7O43513 233 aa25.9■■□□□ 1.74
SSBP4-201ENST00000270061 BRD2P25440 801 aaKnown RBP25.9■■□□□ 1.74
SSBP4-201ENST00000270061 C1QBPQ07021 282 aaKnown RBP25.9■■□□□ 1.74
SSBP4-201ENST00000270061 ELF2Q15723 593 aa25.9■■□□□ 1.74
SSBP4-201ENST00000270061 WSCD1Q658N2 575 aa25.9■■□□□ 1.74
SSBP4-201ENST00000270061 THEM5Q8N1Q8 247 aa25.9■■□□□ 1.74
SSBP4-201ENST00000270061 HES6Q96HZ4 224 aa25.9■■□□□ 1.74
SSBP4-201ENST00000270061 CAPZA3Q96KX2 299 aa25.9■■□□□ 1.74
SSBP4-201ENST00000270061 NUP85Q9BW27 656 aa25.9■■□□□ 1.74
SSBP4-201ENST00000270061 PTPN2P17706 415 aa25.89■■□□□ 1.73
SSBP4-201ENST00000270061 TDGQ13569 410 aa25.89■■□□□ 1.73
SSBP4-201ENST00000270061 ELMOD1Q8N336 334 aa25.89■■□□□ 1.73
SSBP4-201ENST00000270061 SLC4A11Q8NBS3 891 aa25.89■■□□□ 1.73
SSBP4-201ENST00000270061 ZNF564Q8TBZ8 553 aaPredicted RBP25.89■■□□□ 1.73
SSBP4-201ENST00000270061 TFAP2BQ92481 460 aa25.89■■□□□ 1.73
SSBP4-201ENST00000270061 TMEM176AQ96HP8 235 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms