RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 GPATCH2LQ9NWQ4 482 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 SOX13Q9UN79 622 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 NALCNQ8IZF0 1738 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 STIP1P31948 543 aaKnown RBP11.97□□□□□ -0.49
VPS33A-201ENST00000267199 FAAP100Q0VG06 881 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 C16orf72Q14CZ0 275 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 RNF43Q68DV7 783 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 GRIP2Q9C0E4 1043 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 PALMDQ9NP74 551 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 NMRK1Q9NWW6 199 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 GGA3Q9NZ52 723 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 IL1RAPL1Q9NZN1 696 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 SLC39A10Q9ULF5 831 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 RGPD1P0DJD0 1748 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 SMAPO00193 183 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 TM9SF1O15321 606 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 MGRN1O60291 552 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 PROCP04070 461 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 RAG1P15918 1043 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 MLH1P40692 756 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 CDK16Q00536 496 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 PPIDQ08752 370 aaKnown RBP11.97□□□□□ -0.49
VPS33A-201ENST00000267199 EFCAB3Q8N7B9 438 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 CNDP1Q96KN2 507 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 SRPK1Q96SB4 655 aaKnown RBP11.97□□□□□ -0.49
VPS33A-201ENST00000267199 ELP3Q9H9T3 547 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 MAP3K20Q9NYL2 800 aaKnown RBP11.97□□□□□ -0.49
VPS33A-201ENST00000267199 HACL1Q9UJ83 578 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 STARD13Q9Y3M8 1113 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 MED1Q15648 1581 aaPredicted RBP11.97□□□□□ -0.49
VPS33A-201ENST00000267199 BCL9LQ86UU0 1499 aa11.97□□□□□ -0.49
VPS33A-201ENST00000267199 ANGPT2O15123 496 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 TMCC1O94876 653 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 KCNA4P22459 653 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 BACE1P56817 501 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 ARMC3Q5W041 872 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 MAP4K3Q8IVH8 894 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 USP33Q8TEY7 942 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 DIS3LQ8TF46 1054 aaKnown RBP11.96□□□□□ -0.49
VPS33A-201ENST00000267199 FAM84AQ96KN4 292 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 PIH1D1Q9NWS0 290 aaKnown RBP11.96□□□□□ -0.49
VPS33A-201ENST00000267199 NCANO14594 1321 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 SPEF2Q9C093 1822 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 ARHGEF37A1IGU5 675 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 PEX1O43933 1283 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 CSDE1O75534 798 aaKnown RBP11.96□□□□□ -0.49
VPS33A-201ENST00000267199 ITGB5P18084 799 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 TRPC1P48995 793 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 C1QBPQ07021 282 aaKnown RBP11.96□□□□□ -0.49
VPS33A-201ENST00000267199 TMEM62Q0P6H9 643 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 MAPRE2Q15555 327 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 SLC35G1Q2M3R5 365 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 SPDYCQ5MJ68 293 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 ECHDC2Q86YB7 292 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 SAR1AQ9NR31 198 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 PRMT7Q9NVM4 692 aaPredicted RBP11.96□□□□□ -0.49
VPS33A-201ENST00000267199 PCYOX1Q9UHG3 505 aa11.96□□□□□ -0.49
VPS33A-201ENST00000267199 KBTBD13C9JR72 458 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 GLRBP48167 497 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 CLCN3P51790 818 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 VCPP55072 806 aaKnown RBP11.96□□□□□ -0.5
VPS33A-201ENST00000267199 HDAC4P56524 1084 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 SLC25A3Q00325 362 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 CXCL9Q07325 125 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 STILQ15468 1287 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 ATP13A4Q4VNC1 1196 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 FAM71AQ8IYT1 594 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 CLEC4FQ8N1N0 589 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 DDHD1Q8NEL9 900 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 SHC3Q92529 594 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 GLIS2Q9BZE0 524 aaPredicted RBP11.96□□□□□ -0.5
VPS33A-201ENST00000267199 AVENQ9NQS1 362 aaPredicted RBP11.96□□□□□ -0.5
VPS33A-201ENST00000267199 VAV3Q9UKW4 847 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 CDYLQ9Y232 598 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 IL18RAPO95256 599 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 MT-CO1P00395 513 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 S100BP04271 92 aaPredicted RBP11.96□□□□□ -0.5
VPS33A-201ENST00000267199 INPP5AQ14642 412 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 BOLA3Q53S33 107 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 SLC9A9Q8IVB4 645 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 IL31RAQ8NI17 732 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 ZNF212Q9UDV6 495 aa11.96□□□□□ -0.5
VPS33A-201ENST00000267199 SPRP35270 261 aaPredicted RBP11.95□□□□□ -0.5
VPS33A-201ENST00000267199 ARPP19P56211 112 aa11.95□□□□□ -0.5
VPS33A-201ENST00000267199 MRPS15P82914 257 aaKnown RBP11.95□□□□□ -0.5
VPS33A-201ENST00000267199 FMO1Q01740 532 aa11.95□□□□□ -0.5
VPS33A-201ENST00000267199 RIPK1Q13546 671 aa11.95□□□□□ -0.5
VPS33A-201ENST00000267199 PTK6Q13882 451 aa11.95□□□□□ -0.5
VPS33A-201ENST00000267199 NBPF12Q5TAG4 269 aaPredicted RBP11.95□□□□□ -0.5
VPS33A-201ENST00000267199 BBS5Q8N3I7 341 aa11.95□□□□□ -0.5
VPS33A-201ENST00000267199 CHST13Q8NET6 341 aa11.95□□□□□ -0.5
VPS33A-201ENST00000267199 RPS6KL1Q9Y6S9 549 aa11.95□□□□□ -0.5
VPS33A-201ENST00000267199 TOPAZ1Q8N9V7 1692 aa11.95□□□□□ -0.5
VPS33A-201ENST00000267199 TCRBV7S2A1N4TA0A589 114 aa11.95□□□□□ -0.5
VPS33A-201ENST00000267199 STRNO43815 780 aa11.95□□□□□ -0.5
VPS33A-201ENST00000267199 PAMP19021 973 aa11.95□□□□□ -0.5
VPS33A-201ENST00000267199 RAP1GAPP47736 663 aa11.95□□□□□ -0.5
VPS33A-201ENST00000267199 DRG2P55039 364 aaKnown RBP11.95□□□□□ -0.5
VPS33A-201ENST00000267199 PDAP1Q13442 181 aaKnown RBP11.95□□□□□ -0.5
VPS33A-201ENST00000267199 TBCCQ15814 346 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms