RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 C15orf52Q6ZUT6 534 aaKnown RBP9.13□□□□□ -0.95
VAPB-201ENST00000265619 LPCAT2Q7L5N7 544 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 GPBP1Q86WP2 473 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 CPXCR1Q8N123 301 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 TMCO5AQ8N6Q1 288 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 MAML3Q96JK9 1138 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 TCHPQ9BT92 498 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 RUSC1Q9BVN2 902 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 ZBTB21Q9ULJ3 1066 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 KIAA1024Q9UPX6 916 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 MIF4GDA9UHW6 222 aaKnown RBP9.13□□□□□ -0.95
VAPB-201ENST00000265619 SPECC1L-ADORA2AF8WAN1 911 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 FSCN2O14926 492 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 DENRO43583 198 aaKnown RBP9.13□□□□□ -0.95
VAPB-201ENST00000265619 ENTPD3O75355 529 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 FGRP09769 529 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 GABRB3P28472 473 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 STAT3P40763 770 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 ATXN3P54252 364 aaPredicted RBP9.13□□□□□ -0.95
VAPB-201ENST00000265619 OGFRL1Q5TC84 451 aaPredicted RBP9.13□□□□□ -0.95
VAPB-201ENST00000265619 TAB3Q8N5C8 712 aaPredicted RBP9.13□□□□□ -0.95
VAPB-201ENST00000265619 SCAIQ8N9R8 606 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 ACER1Q8TDN7 264 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 MORC4Q8TE76 937 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 PYROXD1Q8WU10 500 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 SERAC1Q96JX3 654 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 CCDC77Q9BR77 488 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 WDR83Q9BRX9 315 aaKnown RBP9.13□□□□□ -0.95
VAPB-201ENST00000265619 PKD2L1Q9P0L9 805 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 TAGLN3Q9UI15 199 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 POU2F3Q9UKI9 436 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 A0A1B0GUL6 1792 aa9.13□□□□□ -0.95
VAPB-201ENST00000265619 SCN9AQ15858 1988 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 UNCXA6NJT0 531 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 SFI1A8K8P3 1242 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 USP17L15C9J2P7 530 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 USP17L13C9JLJ4 530 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 USP17L11C9JVI0 530 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 USP17L18D6R9N7 530 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 USP17L22D6RA61 530 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 USP17L17D6RBQ6 530 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 USP17L19D6RCP7 530 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 USP17L20D6RJB6 530 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 TKTP29401 623 aaKnown RBP9.12□□□□□ -0.95
VAPB-201ENST00000265619 USP17L24Q0WX57 530 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 TFDP1Q14186 410 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 SPOPLQ6IQ16 392 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 DHRS4L2Q6PKH6 230 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 USP17L6PQ6QN14 398 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 FRMD5Q7Z6J6 570 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 BANPQ8N9N5 519 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 HAS1Q92839 578 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 NSMCE3Q96MG7 304 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 MMP19Q99542 508 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 AGPAT1Q99943 283 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 TUBB6Q9BUF5 446 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 CEP44Q9C0F1 390 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 UVRAGQ9P2Y5 699 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 ATP8B3O60423 1300 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 LAMB1P07942 1786 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 IPO5O00410 1097 aaKnown RBP9.12□□□□□ -0.95
VAPB-201ENST00000265619 MEIS1O00470 390 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 GGPS1O95749 300 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 PABPC1P11940 636 aaKnown RBP9.12□□□□□ -0.95
VAPB-201ENST00000265619 NR4A1P22736 598 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 HOXA13P31271 388 aaPredicted RBP9.12□□□□□ -0.95
VAPB-201ENST00000265619 SLC18A1P54219 525 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 JAG1P78504 1218 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 GRM4Q14833 912 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 MSS51Q4VC12 460 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 C6orf163Q5TEZ5 329 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 HHIPL2Q6UWX4 724 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 ARID3BQ8IVW6 561 aaPredicted RBP9.12□□□□□ -0.95
VAPB-201ENST00000265619 TANKQ92844 425 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 SLCO2A1Q92959 643 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 ZDHHC15Q96MV8 337 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 ACAP3Q96P50 834 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 EIF2AQ9BY44 585 aaKnown RBP9.12□□□□□ -0.95
VAPB-201ENST00000265619 ZNF696Q9H7X3 374 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 ZNF70Q9UC06 446 aaPredicted RBP9.12□□□□□ -0.95
VAPB-201ENST00000265619 ZNRF3Q9ULT6 936 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 CDC14AQ9UNH5 594 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 RNF11Q9Y3C5 154 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 CLUHO75153 1309 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 COL11A2P13942 1736 aaPredicted RBP9.12□□□□□ -0.95
VAPB-201ENST00000265619 ARHGAP10A1A4S6 786 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 CYB561D2O14569 222 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 ATE1O95260 518 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 PROCP04070 461 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 PLA2G4BP0C869 781 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 PCP11498 1178 aaKnown RBP9.12□□□□□ -0.95
VAPB-201ENST00000265619 CYP2C9P11712 490 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 HIC1Q14526 733 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 KCNJ8Q15842 424 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 GPR162Q16538 588 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 KRT79Q5XKE5 535 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 SLC30A10Q6XR72 485 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 KYAT3Q6YP21 454 aaKnown RBP9.12□□□□□ -0.95
VAPB-201ENST00000265619 IQCF2Q8IXL9 164 aa9.12□□□□□ -0.95
VAPB-201ENST00000265619 MICALL2Q8IY33 904 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms