RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 IRF6O14896 467 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 SUPT3HO75486 399 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 LGALS2P05162 132 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 ITGB5P18084 799 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 CDH18Q13634 790 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 ACVR2BQ13705 512 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 MFSD10Q14728 455 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 SYTL3Q4VX76 610 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 ZRANB3Q5FWF4 1079 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 C6orf10Q5SRN2 563 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 RARS2Q5T160 578 aaKnown RBP14.49□□□□□ -0.09
CDH3-201ENST00000264012 ETNPPLQ8TBG4 499 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 DTX3LQ8TDB6 740 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 SGF29Q96ES7 293 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 TMA16Q96EY4 203 aaKnown RBP14.49□□□□□ -0.09
CDH3-201ENST00000264012 MTG1Q9BT17 334 aaPredicted RBP14.49□□□□□ -0.09
CDH3-201ENST00000264012 MRPL1Q9BYD6 325 aaKnown RBP14.49□□□□□ -0.09
CDH3-201ENST00000264012 DCLK3Q9C098 648 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 PCDH9Q9HC56 1237 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 CD274Q9NZQ7 290 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 PKP3Q9Y446 797 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 SLIT3O75094 1523 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 MANSC4A6NHS7 340 aaPredicted RBP14.49□□□□□ -0.09
CDH3-201ENST00000264012 B2RBV5 119 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 CES2O00748 559 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 STX7O15400 261 aaKnown RBP14.49□□□□□ -0.09
CDH3-201ENST00000264012 HOXA2O43364 376 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 ACAT1P24752 427 aaKnown RBP14.49□□□□□ -0.09
CDH3-201ENST00000264012 PRKCIP41743 596 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 BFSP2Q13515 415 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 NFE2Q16621 373 aaPredicted RBP14.49□□□□□ -0.09
CDH3-201ENST00000264012 ICA1LQ8NDH6 482 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 HDAC7Q8WUI4 952 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 HSD17B14Q9BPX1 270 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 BATF3Q9NR55 127 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 F5H5T6 163 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 JCHAINP01591 159 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 PAEPP09466 180 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 CHRM3P20309 590 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 CYP2F1P24903 491 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 FBXW10Q5XX13 1052 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 KIF2BQ8N4N8 673 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 MYCBPAPQ8TBZ2 947 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 BLOC1S5Q8TDH9 187 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 PAFAH2Q99487 392 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 STARD7Q9NQZ5 370 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 PRDM4Q9UKN5 801 aa14.49□□□□□ -0.09
CDH3-201ENST00000264012 H0Y626 953 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 DNAJC8O75937 253 aaPredicted RBP14.48□□□□□ -0.09
CDH3-201ENST00000264012 IL10P22301 178 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 FAM83EQ2M2I3 478 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 SPDYAQ5MJ70 313 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 USP50Q70EL3 339 aaPredicted RBP14.48□□□□□ -0.09
CDH3-201ENST00000264012 EPS8L1Q8TE68 723 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 TBCBQ99426 244 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 LRRC40Q9H9A6 602 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 CDYLQ9Y232 598 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 DCDC2CA8MYV0 355 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 RHOBTB1O94844 696 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 POMCP01189 267 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 AKR1A1P14550 325 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 GLRA2P23416 452 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 EFEMP1Q12805 493 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 PPIL2Q13356 520 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 TMEM161BQ8NDZ6 487 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 TNFRSF25Q93038 417 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 CMTM5Q96DZ9 223 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 APOL2Q9BQE5 337 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 THTPAQ9BU02 230 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 RAB21Q9UL25 225 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 EPHB6O15197 1021 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 MICAL2O94851 1124 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 RARAP10276 462 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 RPL10AP62906 217 aaKnown RBP14.48□□□□□ -0.09
CDH3-201ENST00000264012 OVGP1Q12889 678 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 NT5DC4Q86YG4 428 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 CREG2Q8IUH2 290 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 CXorf38Q8TB03 319 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 KCNK16Q96T55 309 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 LBHD1Q9BQE6 289 aaPredicted RBP14.48□□□□□ -0.09
CDH3-201ENST00000264012 TMEM134Q9H6X4 195 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 AURKCQ9UQB9 309 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 CFAP99D6REC4 459 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 AIM2O14862 343 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 LRG1P02750 347 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 SPATA31C1P0DKV0 1188 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 STMN1P16949 149 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 MFSD7Q6UXD7 560 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 PRUNE1Q86TP1 453 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 FOPNLQ96NB1 174 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 PCDHGC5Q9Y5F6 944 aa14.48□□□□□ -0.09
CDH3-201ENST00000264012 H3BQF6 201 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 GLRA3O75311 464 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 ADRB2P07550 413 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 EIF4BP23588 611 aaKnown RBP14.47□□□□□ -0.09
CDH3-201ENST00000264012 GTF2H3Q13889 308 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 CELF3Q5SZQ8 465 aaKnown RBP14.47□□□□□ -0.09
CDH3-201ENST00000264012 ERMARDQ5T6L9 678 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 OVOS1Q6IE37 1185 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 ZNF280DQ6N043 979 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms