RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 CFAP61Q8NHU2 1237 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 JOSD2Q8TAC2 188 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 FAXDC2Q96IV6 333 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 RAB6BQ9NRW1 208 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 COL1A2P08123 1366 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 O00370 1275 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 ETS1P14921 441 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 DRD4P21917 467 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 ASPAP45381 313 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 ITIH4Q14624 930 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 SWT1Q5T5J6 900 aaKnown RBP16.98■□□□□ 0.31
CTCF-201ENST00000264010 BBS12Q6ZW61 710 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 LCP1P13796 627 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 ZNF132P52740 706 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 POU5F1BQ06416 359 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 PDK2Q15119 407 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 KIAA0319LQ8IZA0 1049 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 ZDHHC14Q8IZN3 488 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 C4orf33Q8N1A6 199 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 NME8Q8N427 588 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 FNIP1Q8TF40 1166 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 SNTG2Q9NY99 539 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 EFR3BQ9Y2G0 817 aa16.98■□□□□ 0.31
CTCF-201ENST00000264010 I3L4J1 428 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 ABHD2P08910 425 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 CCDC14Q49A88 953 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 GLRA4Q5JXX5 417 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 BSPRYQ5W0U4 402 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 TRPM8Q7Z2W7 1104 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 RNF34Q969K3 372 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 CPXM1Q96SM3 734 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 PDZD7Q9H5P4 517 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 GEMIN4P57678 1058 aaKnown RBP16.97■□□□□ 0.31
CTCF-201ENST00000264010 SLC27A1Q6PCB7 646 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 TXLNGYQ9BZA5 131 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 CTNNAL1Q9UBT7 734 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 SLC24A2Q9UI40 661 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 APOC4-APOC2K7ER74 178 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 DNAJC6O75061 913 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 CILPO75339 1184 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 APOC2P02655 101 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 IQSEC1Q6DN90 963 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 DRICH1Q6PGQ1 229 aaPredicted RBP16.97■□□□□ 0.31
CTCF-201ENST00000264010 APPL2Q8NEU8 664 aa16.97■□□□□ 0.31
CTCF-201ENST00000264010 IGKV6-21A0A0C4DH24 114 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 WDR91A4D1P6 747 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 KRT37O76014 449 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 GNL1P36915 607 aaPredicted RBP16.96■□□□□ 0.31
CTCF-201ENST00000264010 CDKN2BP42772 138 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 PAPOLAP51003 745 aaKnown RBP16.96■□□□□ 0.31
CTCF-201ENST00000264010 ACVR2BQ13705 512 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 TMEM154Q6P9G4 183 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 NKD2Q969F2 451 aaPredicted RBP16.96■□□□□ 0.31
CTCF-201ENST00000264010 ZMAT2Q96NC0 199 aaKnown RBP16.96■□□□□ 0.31
CTCF-201ENST00000264010 ELOVL4Q9GZR5 314 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 SEPT10Q9P0V9 454 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 CHMP2BQ9UQN3 213 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 ACADSBP45954 432 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 RASSF2P50749 326 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 FAM172AQ8WUF8 416 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 MINDY3Q9H8M7 445 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 SAE1Q9UBE0 346 aaPredicted RBP16.96■□□□□ 0.31
CTCF-201ENST00000264010 MYH9P35579 1960 aaKnown RBP16.96■□□□□ 0.31
CTCF-201ENST00000264010 E5RJQ4 531 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 PNPLA4P41247 253 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 ZNF143P52747 638 aaPredicted RBP16.96■□□□□ 0.31
CTCF-201ENST00000264010 ACBD5Q5T8D3 534 aaPredicted RBP16.96■□□□□ 0.31
CTCF-201ENST00000264010 CCDC62Q6P9F0 684 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 MYLK4Q86YV6 388 aaPredicted RBP16.96■□□□□ 0.31
CTCF-201ENST00000264010 SLC4A11Q8NBS3 891 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 CCNYQ8ND76 341 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 ATXN2LQ8WWM7 1075 aaKnown RBP16.96■□□□□ 0.31
CTCF-201ENST00000264010 OSMRQ99650 979 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 ADAM33Q9BZ11 813 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 BATF3Q9NR55 127 aa16.96■□□□□ 0.31
CTCF-201ENST00000264010 ATXN2Q99700 1313 aaKnown RBP16.95■□□□□ 0.3
CTCF-201ENST00000264010 LRCH4O75427 683 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 SERPINB4P48594 390 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 ARHGAP1Q07960 439 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 XYLT1Q86Y38 959 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 TMEM192Q8IY95 271 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 KDM4CQ9H3R0 1056 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 PLEKHA5Q9HAU0 1116 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 PHIPQ8WWQ0 1821 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 SPAG6O75602 509 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 ERBB2P04626 1255 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 NIPA2Q8N8Q9 360 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 RNF169Q8NCN4 708 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 ALKBH8Q96BT7 664 aaKnown RBP16.95■□□□□ 0.3
CTCF-201ENST00000264010 MAGEB18Q96M61 343 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 FRMD8Q9BZ67 464 aaPredicted RBP16.95■□□□□ 0.3
CTCF-201ENST00000264010 LZTS1Q9Y250 596 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 TRUB2O95900 331 aaKnown RBP16.95■□□□□ 0.3
CTCF-201ENST00000264010 EDN1P05305 212 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 GRM5P41594 1212 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 MTM1Q13496 603 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 HEATR6Q6AI08 1181 aaKnown RBP16.95■□□□□ 0.3
CTCF-201ENST00000264010 FBXO36Q8NEA4 188 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 TINF2Q9BSI4 451 aa16.95■□□□□ 0.3
CTCF-201ENST00000264010 ETNK1Q9HBU6 452 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms