RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CYP2F1P24903 491 aa23.98■■□□□ 1.43
SMARCB1-201ENST00000263121 MIPP30301 263 aa23.98■■□□□ 1.43
SMARCB1-201ENST00000263121 ZNF365Q70YC5 407 aa23.98■■□□□ 1.43
SMARCB1-201ENST00000263121 SLC39A11Q8N1S5 342 aa23.98■■□□□ 1.43
SMARCB1-201ENST00000263121 SCML4Q8N228 414 aa23.98■■□□□ 1.43
SMARCB1-201ENST00000263121 ANKRD7Q92527 254 aa23.98■■□□□ 1.43
SMARCB1-201ENST00000263121 ZNF558Q96NG5 402 aa23.98■■□□□ 1.43
SMARCB1-201ENST00000263121 NR2E1Q9Y466 385 aa23.98■■□□□ 1.43
SMARCB1-201ENST00000263121 SART1O43290 800 aaKnown RBP23.97■■□□□ 1.43
SMARCB1-201ENST00000263121 KRT7P08729 469 aa23.97■■□□□ 1.43
SMARCB1-201ENST00000263121 RHOXF2BP0C7M4 288 aa23.97■■□□□ 1.43
SMARCB1-201ENST00000263121 RSPO2Q6UXX9 243 aaPredicted RBP23.97■■□□□ 1.43
SMARCB1-201ENST00000263121 C7orf61Q8IZ16 206 aa23.97■■□□□ 1.43
SMARCB1-201ENST00000263121 RCOR2Q8IZ40 523 aa23.97■■□□□ 1.43
SMARCB1-201ENST00000263121 CENPIQ92674 756 aaPredicted RBP23.97■■□□□ 1.43
SMARCB1-201ENST00000263121 RBM41Q96IZ5 413 aaKnown RBP23.97■■□□□ 1.43
SMARCB1-201ENST00000263121 RHOXF2Q9BQY4 288 aa23.97■■□□□ 1.43
SMARCB1-201ENST00000263121 ABI2Q9NYB9 513 aaPredicted RBP23.97■■□□□ 1.43
SMARCB1-201ENST00000263121 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.97■■□□□ 1.43
SMARCB1-201ENST00000263121 USP18Q9UMW8 372 aa23.97■■□□□ 1.43
SMARCB1-201ENST00000263121 FSCN2O14926 492 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 TRUB2O95900 331 aaKnown RBP23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 KRT1P04264 644 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 LAG3P18627 525 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 MATKP42679 507 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 YWHAZP63104 245 aaKnown RBP23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 USP41Q3LFD5 358 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 RAB6CQ53S08 254 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 SPOUT1Q5T280 376 aaKnown RBP23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 VSTM1Q6UX27 236 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 BHLHA9Q7RTU4 235 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 ZDHHC14Q8IZN3 488 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 FAM172AQ8WUF8 416 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 SLC2A13Q96QE2 648 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 NCAPGQ9BPX3 1015 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 RAB6CQ9H0N0 254 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 CHST7Q9NS84 486 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 KLHL11Q9NVR0 708 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 PCDHB5Q9Y5E4 795 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 USP3Q9Y6I4 520 aa23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 COL4A4P53420 1690 aaPredicted RBP23.96■■□□□ 1.43
SMARCB1-201ENST00000263121 CARNS1A5YM72 827 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 ZBED1O96006 694 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 DESP17661 470 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 MAGEA11P43364 429 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 EPHB4P54760 987 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 ATP11AP98196 1134 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 GPR17Q13304 367 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 SIX1Q15475 284 aaPredicted RBP23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 CDO1Q16878 200 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 PM20D1Q6GTS8 502 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 CYP4V2Q6ZWL3 525 aaPredicted RBP23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 DEFB106AQ8N104 65 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 COLGALT1Q8NBJ5 622 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 IRGQQ8WZA9 623 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 FAM149B1Q96BN6 582 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 SLITRK1Q96PX8 696 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 PEBP4Q96S96 227 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 YME1L1Q96TA2 773 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 KRT12Q99456 494 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 LRRC1Q9BTT6 524 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 ZWILCHQ9H900 591 aa23.95■■□□□ 1.43
SMARCB1-201ENST00000263121 TCRBV7S2A1N4TA0A589 114 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 ZBBXA8MT70 800 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 TNFRSF10BO14763 440 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 USP17L7P0C7H9 530 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 TFE3P19532 575 aaPredicted RBP23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 GRIK1P39086 918 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 HTRA4P83105 476 aaPredicted RBP23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 GLE1Q53GS7 698 aaKnown RBP23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 TMEM240Q5SV17 173 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 PRSS55Q6UWB4 352 aaPredicted RBP23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 HFE2Q6ZVN8 426 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 ANKS1BQ7Z6G8 1248 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 ADAT2Q7Z6V5 191 aaKnown RBP23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 CCDC50Q8IVM0 306 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 PIK3R5Q8WYR1 880 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 HERPUD2Q9BSE4 406 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 ADAM33Q9BZ11 813 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 POPDC2Q9HBU9 364 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 NGRNQ9NPE2 291 aaKnown RBP23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 MTRRQ9UBK8 725 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 PCSK1NQ9UHG2 260 aa23.95■■□□□ 1.42
SMARCB1-201ENST00000263121 KIAA1671Q9BY89 1806 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 GOLGA6L10A0A0M3HER8 536 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 TARSL2A2RTX5 802 aaKnown RBP23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 YJEFN3A6XGL0 299 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 E7ENQ6 273 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 GJB5O95377 273 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 NOS2P35228 1153 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 PTPN7P35236 360 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 HDAC4P56524 1084 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 COPS2P61201 443 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 SMARCB1Q12824 385 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 SMC1AQ14683 1233 aaKnown RBP23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 CCDC70Q6NSX1 233 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 C8orf74Q6P047 294 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 PSRC1Q6PGN9 363 aaPredicted RBP23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 KLHL7Q8IXQ5 586 aa23.94■■□□□ 1.42
SMARCB1-201ENST00000263121 RAPGEF5Q92565 580 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms