RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ANKRD20A3Q5VUR7 823 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 RELL1Q8IUW5 271 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 HNRNPABQ99729 332 aaKnown RBP8.57□□□□□ -1.04
PTPN3-201ENST00000262539 LACTBL1A8MY62 500 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 SMIM24O75264 130 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 ARIH2O95376 493 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 TROVE2P10155 538 aaKnown RBP eCLIP8.57□□□□□ -1.04
PTPN3-201ENST00000262539 MAMLD1Q13495 774 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 ZBTB41Q5SVQ8 909 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 IZUMO3Q5VZ72 239 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 TAPT1Q6NXT6 567 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 SCML4Q8N228 414 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 OR5B17Q8NGF7 314 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 SH3TC2Q8TF17 1288 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 SH2D3AQ9BRG2 576 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 CPA4Q9UI42 421 aa8.57□□□□□ -1.04
PTPN3-201ENST00000262539 ADGRA3Q8IWK6 1321 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 SRGAP2O75044 1071 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 TCEA3O75764 348 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 ATP5BP06576 529 aaKnown RBP8.56□□□□□ -1.04
PTPN3-201ENST00000262539 PEX5P50542 639 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 STX1BP61266 288 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 DYNLT1P63172 113 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 ROR1Q01973 937 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 YWHAHQ04917 246 aaPredicted RBP8.56□□□□□ -1.04
PTPN3-201ENST00000262539 ADCY1Q08828 1119 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 IFT43Q96FT9 208 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 SNX27Q96L92 541 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 PACSIN1Q9BY11 444 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 MAGEB5Q9BZ81 275 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 INTS9Q9NV88 658 aaKnown RBP8.56□□□□□ -1.04
PTPN3-201ENST00000262539 SF3B1O75533 1304 aaKnown RBP eCLIP8.56□□□□□ -1.04
PTPN3-201ENST00000262539 TMEM247A6NEH6 219 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 HAS3O00219 553 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 TTC4O95801 387 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 CPB1P15086 417 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 ATP4AP20648 1035 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 CDH6P55285 790 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 HEATR6Q6AI08 1181 aaKnown RBP8.56□□□□□ -1.04
PTPN3-201ENST00000262539 ZNF280DQ6N043 979 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 FAM117BQ6P1L5 589 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 SLC39A4Q6P5W5 647 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 C17orf99Q6UX52 265 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 C2orf15Q8WU43 125 aaKnown RBP8.56□□□□□ -1.04
PTPN3-201ENST00000262539 NTAN1Q96AB6 310 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 CENPTQ96BT3 561 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 MS4A4AQ96JQ5 239 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 NEUROG2Q9H2A3 272 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 TSR3Q9UJK0 312 aaKnown RBP8.56□□□□□ -1.04
PTPN3-201ENST00000262539 APOL1O14791 398 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 MLNP12872 115 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 STMN1P16949 149 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 HADHAP40939 763 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 PPP2R2AP63151 447 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 SNX1Q13596 522 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 VSTM1Q6UX27 236 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 PHLDB2Q86SQ0 1253 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 C1orf127Q8N9H9 656 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 SEMA4DQ92854 862 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 SLC4A5Q9BY07 1137 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 DCLK3Q9C098 648 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 COG4Q9H9E3 785 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 TRHDEQ9UKU6 1024 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 ATP8A1Q9Y2Q0 1164 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 EOMESO95936 686 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 CPP00450 1065 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 CXCR5P32302 372 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 PDE1BQ01064 536 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 PDCLQ13371 301 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 MFSD5Q6N075 450 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 IFNL1Q8IU54 200 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 PASD1Q8IV76 773 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 SYT15Q9BQS2 421 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 FBXO44Q9H4M3 255 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 SETD4Q9NVD3 440 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 COMMD8Q9NX08 183 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 CNTN3Q9P232 1028 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 TRIM10Q9UDY6 481 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 DUSP10Q9Y6W6 482 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 MYH13Q9UKX3 1938 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 GPC4O75487 556 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 SMPD1P17405 629 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 NOS2P35228 1153 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 EMC10Q5UCC4 262 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 GJB7Q6PEY0 223 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 LZICQ8WZA0 190 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 PNKPQ96T60 521 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 VCX3AQ9NNX9 186 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 ORC6Q9Y5N6 252 aa8.56□□□□□ -1.04
PTPN3-201ENST00000262539 DDX60LQ5H9U9 1706 aaKnown RBP8.56□□□□□ -1.04
PTPN3-201ENST00000262539 SMIM28A0A1B0GU29 152 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 DNALI1O14645 258 aaPredicted RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 PYGLP06737 847 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 CREMQ03060 361 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 KRT17Q04695 432 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 ZSCAN26Q16670 478 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 DARS2Q6PI48 645 aaKnown RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 SLC47A2Q86VL8 602 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 LMNTD2Q8IXW0 634 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 TMCO5AQ8N6Q1 288 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms