RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CEP250Q9BV73 2442 aa12.99□□□□□ -0.33
TRAF4-202ENST00000262396 DCLK1O15075 740 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 KAT7O95251 611 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 KLF8O95600 359 aaPredicted RBP12.98□□□□□ -0.33
TRAF4-202ENST00000262396 NR3C1P04150 777 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 RPN1P04843 607 aaKnown RBP12.98□□□□□ -0.33
TRAF4-202ENST00000262396 CYP17A1P05093 508 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 ADORA2BP29275 332 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 DHPSP49366 369 aaPredicted RBP12.98□□□□□ -0.33
TRAF4-202ENST00000262396 SLC5A3P53794 718 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 KRT85P78386 507 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 MRPS21P82921 87 aaKnown RBP12.98□□□□□ -0.33
TRAF4-202ENST00000262396 BYSLQ13895 437 aaKnown RBP12.98□□□□□ -0.33
TRAF4-202ENST00000262396 KMT5BQ4FZB7 885 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 STPG1Q5TH74 334 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 SDE2Q6IQ49 451 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 CYP2U1Q7Z449 544 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 ADGRG2Q8IZP9 1017 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 PARD3BQ8TEW8 1205 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 USP33Q8TEY7 942 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 PAGE5Q96GU1 130 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 ZC3H10Q96K80 434 aaKnown RBP12.98□□□□□ -0.33
TRAF4-202ENST00000262396 CNTNAP3BQ96NU0 1288 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 KCNK16Q96T55 309 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 CNTNAP3Q9BZ76 1288 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 SMOC1Q9H4F8 434 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 FBXO44Q9H4M3 255 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 TLR8Q9NR97 1041 aaKnown RBP12.98□□□□□ -0.33
TRAF4-202ENST00000262396 LSM7Q9UK45 103 aaKnown RBP12.98□□□□□ -0.33
TRAF4-202ENST00000262396 FRYLO94915 3013 aa12.98□□□□□ -0.33
TRAF4-202ENST00000262396 A0A1B0GVL5 298 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 E2F8A0AVK6 867 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 PDXKO00764 312 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 KHNYNO15037 678 aaKnown RBP12.97□□□□□ -0.33
TRAF4-202ENST00000262396 COCHO43405 550 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 OAS1P00973 400 aaKnown RBP12.97□□□□□ -0.33
TRAF4-202ENST00000262396 ADRB1P08588 477 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 FAM200BP0CF97 657 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 RPL13P26373 211 aaKnown RBP12.97□□□□□ -0.33
TRAF4-202ENST00000262396 OPRD1P41143 372 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 GRIA2P42262 883 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 SYKP43405 635 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 SLC6A11P48066 632 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 CACNA2D1P54289 1103 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 MAP3K7CLP57077 242 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 STK4Q13043 487 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 ORC1Q13415 861 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 LY6G5CQ5SRR4 150 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 DAB2IPQ5VWQ8 1189 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 TRMT11Q7Z4G4 463 aaKnown RBP12.97□□□□□ -0.33
TRAF4-202ENST00000262396 ALLCQ8N6M5 410 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 KIAA1958Q8N8K9 716 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 NAT16Q8N8M0 369 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 TXNDC5Q8NBS9 432 aaKnown RBP12.97□□□□□ -0.33
TRAF4-202ENST00000262396 SCAMP5Q8TAC9 235 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 SLC2A14Q8TDB8 520 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 TAF4BQ92750 862 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 OTUB2Q96DC9 234 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 EDEM2Q9BV94 578 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 DUSP15Q9H1R2 295 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-202ENST00000262396 FAM49BQ9NUQ9 324 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 COMMD8Q9NX08 183 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 GMIPQ9P107 970 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 DEC1Q9P2X7 70 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 EBF1Q9UH73 591 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 MMP17Q9ULZ9 603 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 ATP6V1DQ9Y5K8 247 aa12.97□□□□□ -0.33
TRAF4-202ENST00000262396 KIF26AQ9ULI4 1882 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-202ENST00000262396 DMXL1Q9Y485 3027 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 K7EQS6 105 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 C4BPAP04003 597 aaKnown RBP12.96□□□□□ -0.33
TRAF4-202ENST00000262396 MYL1P05976 194 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 CCDC130P13994 396 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 PFKFB1P16118 471 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 EIF2DP41214 584 aaKnown RBP12.96□□□□□ -0.33
TRAF4-202ENST00000262396 VAMP7P51809 220 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 NDST1P52848 882 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 EHHADHQ08426 723 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 CRY1Q16526 586 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 HSF5Q4G112 596 aaPredicted RBP12.96□□□□□ -0.33
TRAF4-202ENST00000262396 LPCAT2Q7L5N7 544 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 WHAMMQ8TF30 809 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 HMGB4Q8WW32 186 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 ELMO3Q96BJ8 720 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 CNOT6LQ96LI5 555 aaKnown RBP12.96□□□□□ -0.33
TRAF4-202ENST00000262396 XPO6Q96QU8 1125 aaKnown RBP12.96□□□□□ -0.33
TRAF4-202ENST00000262396 XYLT2Q9H1B5 865 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 CCSER2Q9H7U1 834 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 VRTNQ9H8Y1 702 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 RCOR1Q9UKL0 485 aa12.96□□□□□ -0.33
TRAF4-202ENST00000262396 TCRBV21S2A2A0A5A6 115 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 TLR5O60602 858 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 CD58P19256 250 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 CMA1P23946 247 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 NR2F2P24468 414 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 ATP5C1P36542 298 aaKnown RBP12.95□□□□□ -0.34
TRAF4-202ENST00000262396 TNFRSF4P43489 277 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 LIMK1P53667 647 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 DLG4P78352 724 aa12.95□□□□□ -0.34
TRAF4-202ENST00000262396 ZXDBP98169 803 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms