RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 NDST1P52848 882 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 HIC1Q14526 733 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 UCMAQ8WVF2 138 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 CGRRF1Q99675 332 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 N6AMT1Q9Y5N5 214 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 ADAMTS13Q76LX8 1427 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 CLASP2O75122 1294 aaKnown RBP12.59□□□□□ -0.39
SPG11-201ENST00000261866 STAU1O95793 577 aaKnown RBP12.59□□□□□ -0.39
SPG11-201ENST00000261866 JCHAINP01591 159 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 ITIH2P19823 946 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 COILP38432 576 aaPredicted RBP12.59□□□□□ -0.39
SPG11-201ENST00000261866 CYP24A1Q07973 514 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 SCUBE3Q8IX30 993 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 MCM8Q9UJA3 840 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 CPSF4O95639 269 aaKnown RBP12.59□□□□□ -0.39
SPG11-201ENST00000261866 MT-CO1P00395 513 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 PSEN2P49810 448 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 NAPEPLDQ6IQ20 393 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 TRAPPC11Q7Z392 1133 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 STAMBPL1Q96FJ0 436 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 OSGEPQ9NPF4 335 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 PKD2L2Q9NZM6 624 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 AP4E1Q9UPM8 1137 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 IPPQ9Y573 584 aa12.59□□□□□ -0.39
SPG11-201ENST00000261866 LACTBL1A8MY62 500 aa12.58□□□□□ -0.39
SPG11-201ENST00000261866 MAN1A2O60476 641 aa12.58□□□□□ -0.39
SPG11-201ENST00000261866 CAND2O75155 1236 aa12.58□□□□□ -0.39
SPG11-201ENST00000261866 SUPT7LO94864 414 aa12.58□□□□□ -0.39
SPG11-201ENST00000261866 FNTAP49354 379 aa12.58□□□□□ -0.39
SPG11-201ENST00000261866 FBXO47Q5MNV8 452 aa12.58□□□□□ -0.39
SPG11-201ENST00000261866 YIPF3Q9GZM5 350 aa12.58□□□□□ -0.39
SPG11-201ENST00000261866 GIMAP4Q9NUV9 329 aa12.58□□□□□ -0.39
SPG11-201ENST00000261866 NDE1Q9NXR1 346 aa12.58□□□□□ -0.39
SPG11-201ENST00000261866 VDRP11473 427 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 DARSP14868 501 aaKnown RBP12.58□□□□□ -0.4
SPG11-201ENST00000261866 HERC6Q8IVU3 1022 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 ADAM2Q99965 735 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 CYP7B1O75881 506 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 TMEM253P0C7T8 217 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 AKR1A1P14550 325 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 IL1R1P14778 569 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 BDNFP23560 247 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 CHI3L1P36222 383 aaPredicted RBP12.58□□□□□ -0.4
SPG11-201ENST00000261866 MLH1P40692 756 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 FNDC3BQ53EP0 1204 aaKnown RBP12.58□□□□□ -0.4
SPG11-201ENST00000261866 EARS2Q5JPH6 523 aaKnown RBP12.58□□□□□ -0.4
SPG11-201ENST00000261866 PPM1LQ5SGD2 360 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 KIF2BQ8N4N8 673 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 KCNB2Q92953 911 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 MRPL1Q9BYD6 325 aaKnown RBP12.58□□□□□ -0.4
SPG11-201ENST00000261866 USP18Q9UMW8 372 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 USP17L7P0C7H9 530 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 CAMK2GQ13555 558 aaPredicted RBP12.58□□□□□ -0.4
SPG11-201ENST00000261866 C11orf63Q6NUN7 778 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 WWP1Q9H0M0 922 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 FAM96AQ9H5X1 160 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 ERVK-10P10266 1014 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 SERPINB5P36952 375 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 PTK6Q13882 451 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 HIST2H2ACQ16777 129 aaPredicted RBP12.58□□□□□ -0.4
SPG11-201ENST00000261866 HIST2H2AA3Q6FI13 130 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 HORMAD1Q86X24 394 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 REPS2Q8NFH8 660 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 GPR152Q8TDT2 470 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 RSPH1Q8WYR4 309 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 SYT15Q9BQS2 421 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 ZNF711Q9Y462 761 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 PXDNQ92626 1479 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 CCDC22O60826 627 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 KATNA1O75449 491 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 TCF3P15923 654 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 OTUD4Q01804 1114 aaKnown RBP12.58□□□□□ -0.4
SPG11-201ENST00000261866 OCA2Q04671 838 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 TRMT11Q7Z4G4 463 aaKnown RBP12.58□□□□□ -0.4
SPG11-201ENST00000261866 PRPF39Q86UA1 669 aaKnown RBP12.58□□□□□ -0.4
SPG11-201ENST00000261866 PPIL6Q8IXY8 311 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 RXFP2Q8WXD0 754 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 MAP3K14Q99558 947 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 C10orf88Q9H8K7 445 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 CERS4Q9HA82 394 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 NDOR1Q9UHB4 597 aa12.58□□□□□ -0.4
SPG11-201ENST00000261866 ZC3H13Q5T200 1668 aaKnown RBP12.58□□□□□ -0.4
SPG11-201ENST00000261866 IRF6O14896 467 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 P4HA2O15460 535 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 HNRNPCP07910 306 aaKnown RBP eCLIP12.57□□□□□ -0.47e-10■■■■■ 30.9
SPG11-201ENST00000261866 CES3Q6UWW8 571 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 SEMA4DQ92854 862 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 VPS50Q96JG6 964 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 THTPAQ9BU02 230 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 TLR8Q9NR97 1041 aaKnown RBP12.57□□□□□ -0.4
SPG11-201ENST00000261866 TRIM49D1C9J1S8 452 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 GOLGA8TH3BQL2 631 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 HOXA2O43364 376 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 H2AFYO75367 372 aaKnown RBP12.57□□□□□ -0.4
SPG11-201ENST00000261866 RRM1P23921 792 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 POU6F1Q14863 301 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 ACOX1Q15067 660 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 KCTD19Q17RG1 926 aaPredicted RBP12.57□□□□□ -0.4
SPG11-201ENST00000261866 FBXO36Q8NEA4 188 aa12.57□□□□□ -0.4
SPG11-201ENST00000261866 TPCN2Q8NHX9 752 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms