RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 SSU72Q9NP77 194 aaKnown RBP17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 E5RJQ4 531 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 USP2O75604 605 aaPredicted RBP17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 STAG3L1P0CL83 205 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 TROVE2P10155 538 aaKnown RBP eCLIP17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 PDGFRAP16234 1089 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 ZNF200P98182 395 aaPredicted RBP17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 ZC3H12AQ5D1E8 599 aaKnown RBP17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 OR6B2Q6IFH4 312 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 GADL1Q6ZQY3 521 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 BZW1Q7L1Q6 419 aaKnown RBP17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 APOBEC3FQ8IUX4 373 aaKnown RBP17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 INPP5DQ92835 1189 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 FAM167AQ96KS9 214 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 TSSK1BQ9BXA7 367 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 RNPEPQ9H4A4 650 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 DENND2DQ9H6A0 471 aaPredicted RBP17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 FETUBQ9UGM5 382 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 TEX264Q9Y6I9 313 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 IKBKGQ9Y6K9 419 aa17.07■□□□□ 0.32
TM9SF1-201ENST00000261789 CXorf49A8MYA2 514 aaPredicted RBP17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 FZD9O00144 591 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 SOCS7O14512 581 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 NDC80O14777 642 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 TM9SF1O15321 606 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 INHBAP08476 426 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 TGFB3P10600 412 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 CTAGE3PQ8IX95 158 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 C2orf40Q9H1Z8 148 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 RSAD1Q9HA92 442 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 RNPEPL1Q9HAU8 725 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 ARL8BQ9NVJ2 186 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 WDR35Q9P2L0 1181 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 MCM3APO60318 1980 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 KCNN4O15554 427 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 SERPINB3P29508 390 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 ETV4P43268 484 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 ZNF143P52747 638 aaPredicted RBP17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 KCNJ11Q14654 390 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 NOMO1Q15155 1222 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 CELF3Q5SZQ8 465 aaKnown RBP17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 FAM183BPQ6ZVS7 135 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 TTC7BQ86TV6 843 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 CXorf38Q8TB03 319 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 NUDCD1Q96RS6 583 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 FAM167BQ9BTA0 163 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 MECRQ9BV79 373 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 VPS11Q9H270 941 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 KCNK13Q9HB14 408 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 ASNSD1Q9NWL6 643 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 SUFUQ9UMX1 484 aa17.06■□□□□ 0.32
TM9SF1-201ENST00000261789 UGT1A9O60656 530 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 R3HDM1Q15032 1099 aaKnown RBP17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 GJC2Q5T442 439 aaPredicted RBP17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 PPM1NQ8N819 430 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 SLC44A1Q8WWI5 657 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 FRMD8P1Q9BZ68 369 aaPredicted RBP17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 UGT1A7Q9HAW7 530 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 UGT1A10Q9HAW8 530 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 UGT1A8Q9HAW9 530 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 IFT122Q9HBG6 1241 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 USP29Q9HBJ7 922 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 PDGFCQ9NRA1 345 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 HMGCRP04035 888 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 GNAZP19086 355 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 GPD1P21695 349 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 RBL1P28749 1068 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 GABRB2P47870 512 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 NDST1P52848 882 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 SH3D19Q5HYK7 790 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 TRIM68Q6AZZ1 485 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 SH2D5Q6ZV89 423 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 FGD4Q96M96 766 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 TMEM120AQ9BXJ8 343 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 TRIM55Q9BYV6 548 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 MAGEB5Q9BZ81 275 aa17.05■□□□□ 0.32
TM9SF1-201ENST00000261789 IQANK1A0A1B0GTG1 560 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 C2CD4BA6NLJ0 364 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 WFS1O76024 890 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 APRTP07741 180 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 TPBGLP0DKB5 382 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 CALB2P22676 271 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 PAX7P23759 505 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 IL4RP24394 825 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 PTPN4P29074 926 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 NEK3P51956 506 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 CA9Q16790 459 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 PLD5Q8N7P1 536 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 HPDLQ96IR7 371 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 PHACTR1Q9C0D0 580 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 ZNF395Q9H8N7 513 aaPredicted RBP17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 NGRNQ9NPE2 291 aaKnown RBP17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 TSPAN16Q9UKR8 245 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 TNFSF13BQ9Y275 285 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 LOC285556D6RIA3 1793 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 A0A087WZ62 844 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 PRPSAP2O60256 369 aa17.04■□□□□ 0.32
TM9SF1-201ENST00000261789 STIP1P31948 543 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms