RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 CETN2P41208 172 aa18.51■□□□□ 0.55
SSB-201ENST00000260956 LMNB2Q03252 620 aa18.51■□□□□ 0.55
SSB-201ENST00000260956 LPIN1Q14693 890 aa18.51■□□□□ 0.55
SSB-201ENST00000260956 NOTUMQ6P988 496 aa18.51■□□□□ 0.55
SSB-201ENST00000260956 SRLQ86TD4 932 aa18.51■□□□□ 0.55
SSB-201ENST00000260956 TTC30AQ86WT1 665 aa18.51■□□□□ 0.55
SSB-201ENST00000260956 ZCCHC9Q8N567 271 aaKnown RBP18.51■□□□□ 0.55
SSB-201ENST00000260956 MYCBPAPQ8TBZ2 947 aa18.51■□□□□ 0.55
SSB-201ENST00000260956 KHSRPQ92945 711 aaKnown RBP eCLIP18.51■□□□□ 0.551e-7■■□□□ 13.1
SSB-201ENST00000260956 C18orf25Q96B23 403 aaPredicted RBP18.51■□□□□ 0.55
SSB-201ENST00000260956 SLC4A5Q9BY07 1137 aa18.51■□□□□ 0.55
SSB-201ENST00000260956 ROPN1BQ9BZX4 212 aaPredicted RBP18.51■□□□□ 0.55
SSB-201ENST00000260956 NXF3Q9H4D5 531 aaKnown RBP18.51■□□□□ 0.55
SSB-201ENST00000260956 ROPN1Q9HAT0 212 aaPredicted RBP18.51■□□□□ 0.55
SSB-201ENST00000260956 TULP2O00295 520 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 DPYSL4O14531 572 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 TRAPPC3O43617 180 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 RECQL4O94761 1208 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 MIPP30301 263 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 ADCY8P40145 1251 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 CCT5P48643 541 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 ZNF143P52747 638 aaPredicted RBP18.5■□□□□ 0.55
SSB-201ENST00000260956 IFI35P80217 286 aaPredicted RBP18.5■□□□□ 0.55
SSB-201ENST00000260956 STILQ15468 1287 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 C6orf118Q5T5N4 469 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 KAZNQ674X7 775 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 FAM183BPQ6ZVS7 135 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 CATSPER4Q7RTX7 472 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 UBA3Q8TBC4 463 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 CENPTQ96BT3 561 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 HEXIM2Q96MH2 286 aaKnown RBP18.5■□□□□ 0.55
SSB-201ENST00000260956 GINS2Q9Y248 185 aa18.5■□□□□ 0.55
SSB-201ENST00000260956 TRUB2O95900 331 aaKnown RBP18.49■□□□□ 0.55
SSB-201ENST00000260956 VPS41P49754 854 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 FBXO47Q5MNV8 452 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 ARHGAP17Q68EM7 881 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 FAM109BQ6ICB4 259 aaPredicted RBP18.49■□□□□ 0.55
SSB-201ENST00000260956 OLFML1Q6UWY5 402 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 CCDC25Q86WR0 208 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 TDHQ8IZJ6 230 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 NME8Q8N427 588 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 C12orf29Q8N999 325 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 DBF4BQ8NFT6 615 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 CCHCR1Q8TD31 782 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 ATXN2LQ8WWM7 1075 aaKnown RBP18.49■□□□□ 0.55
SSB-201ENST00000260956 FRMD8P1Q9BZ68 369 aaPredicted RBP18.49■□□□□ 0.55
SSB-201ENST00000260956 CNOT10Q9H9A5 744 aaKnown RBP18.49■□□□□ 0.55
SSB-201ENST00000260956 PCDH9Q9HC56 1237 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 HES2Q9Y543 173 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 C5orf60A6NFR6 353 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 E5RJQ4 531 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 PIRO00625 290 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 ABHD2P08910 425 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 CD48P09326 243 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 ZSCAN5DPP0CG00 497 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 SETSIPP0DME0 302 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 AXLP30530 894 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 RFC2P35250 354 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 RPL34P49207 117 aaKnown RBP18.49■□□□□ 0.55
SSB-201ENST00000260956 SEC24CP53992 1094 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 TAF5Q15542 800 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 SMTNL2Q2TAL5 461 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 GOLGA7BQ2TAP0 167 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 P3H1Q32P28 736 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 RAB6CQ53S08 254 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 PLEKHG4Q58EX7 1191 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 RNASEH2BQ5TBB1 312 aaKnown RBP18.49■□□□□ 0.55
SSB-201ENST00000260956 RASIP1Q5U651 963 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 C9orf57Q5W0N0 161 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 APBB1IPQ7Z5R6 666 aaPredicted RBP18.49■□□□□ 0.55
SSB-201ENST00000260956 RSPH3Q86UC2 560 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 NLRP14Q86W24 1093 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 UHMK1Q8TAS1 419 aaKnown RBP18.49■□□□□ 0.55
SSB-201ENST00000260956 KBTBD7Q8WVZ9 684 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 CNPY3Q9BT09 278 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 RAB6CQ9H0N0 254 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 RABEP2Q9H5N1 569 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 BCCIPQ9P287 314 aaKnown RBP eCLIP18.49■□□□□ 0.55
SSB-201ENST00000260956 LGALS13Q9UHV8 139 aa18.49■□□□□ 0.55
SSB-201ENST00000260956 EYSQ5T1H1 3165 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 RASGRF2O14827 1237 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 FAM107AO95990 144 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 FGBP02675 491 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 ETS1P14921 441 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 KCNE1P15382 129 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 MYO1EQ12965 1108 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 SOWAHAQ2M3V2 549 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 ERMARDQ5T6L9 678 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 PPP1R26Q5T8A7 1209 aaPredicted RBP18.48■□□□□ 0.55
SSB-201ENST00000260956 FAM102AQ5T9C2 384 aaPredicted RBP18.48■□□□□ 0.55
SSB-201ENST00000260956 ACTL9Q8TC94 416 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 ZNF473Q8WTR7 871 aaKnown RBP18.48■□□□□ 0.55
SSB-201ENST00000260956 SLC35F5Q8WV83 523 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 SERPINB12Q96P63 405 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 ZWILCHQ9H900 591 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 RSPH14Q9UHP6 348 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 RRP15Q9Y3B9 282 aaKnown RBP18.48■□□□□ 0.55
SSB-201ENST00000260956 FARP1Q9Y4F1 1045 aaPredicted RBP18.48■□□□□ 0.55
SSB-201ENST00000260956 TRPV2Q9Y5S1 764 aa18.48■□□□□ 0.55
SSB-201ENST00000260956 ATXN2Q99700 1313 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms