RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 HCFC1R1Q9NWW0 138 aa21.8■■□□□ 1.08
RTCA-201ENST00000260563 TRMT1Q9NXH9 659 aaKnown RBP21.8■■□□□ 1.08
RTCA-201ENST00000260563 TAS2R14Q9NYV8 317 aa21.8■■□□□ 1.08
RTCA-201ENST00000260563 EHD2Q9NZN4 543 aa21.8■■□□□ 1.08
RTCA-201ENST00000260563 USP27XA6NNY8 438 aa21.8■■□□□ 1.08
RTCA-201ENST00000260563 TULP2O00295 520 aa21.8■■□□□ 1.08
RTCA-201ENST00000260563 RTN2O75298 545 aa21.8■■□□□ 1.08
RTCA-201ENST00000260563 RTN3O95197 1032 aaPredicted RBP21.8■■□□□ 1.08
RTCA-201ENST00000260563 LSM8O95777 96 aaKnown RBP21.8■■□□□ 1.08
RTCA-201ENST00000260563 PTPN2P17706 415 aa21.8■■□□□ 1.08
RTCA-201ENST00000260563 GRASPQ7Z6J2 395 aaPredicted RBP21.8■■□□□ 1.08
RTCA-201ENST00000260563 RIPOR3Q96MK2 946 aa21.8■■□□□ 1.08
RTCA-201ENST00000260563 UBXN6Q9BZV1 441 aa21.8■■□□□ 1.08
RTCA-201ENST00000260563 LHX5Q9H2C1 402 aa21.8■■□□□ 1.08
RTCA-201ENST00000260563 DNMT3BQ9UBC3 853 aaKnown RBP21.8■■□□□ 1.08
RTCA-201ENST00000260563 UXTQ9UBK9 157 aaPredicted RBP21.8■■□□□ 1.08
RTCA-201ENST00000260563 HHLA1C9JL84 531 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 GPD2P43304 727 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 NOMO3P69849 1222 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 SMAD4Q13485 552 aaKnown RBP21.79■■□□□ 1.08
RTCA-201ENST00000260563 PABPC1LQ4VXU2 614 aaKnown RBP21.79■■□□□ 1.08
RTCA-201ENST00000260563 ATAT1Q5SQI0 421 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 NAA35Q5VZE5 725 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 ACAD10Q6JQN1 1059 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 GPRIN1Q7Z2K8 1008 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 REXO1L1PQ8IX06 675 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 TXLNBQ8N3L3 684 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 LEMD2Q8NC56 503 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 TMEM35BQ8NCS4 154 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 C1orf131Q8NDD1 294 aaKnown RBP21.79■■□□□ 1.08
RTCA-201ENST00000260563 SLC35F5Q8WV83 523 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 TRMT2BQ96GJ1 504 aaKnown RBP21.79■■□□□ 1.08
RTCA-201ENST00000260563 ISCUQ9H1K1 167 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 CDH22Q9UJ99 828 aa21.79■■□□□ 1.08
RTCA-201ENST00000260563 TNFRSF10BO14763 440 aa21.78■■□□□ 1.08
RTCA-201ENST00000260563 FTLP02792 175 aaPredicted RBP21.78■■□□□ 1.08
RTCA-201ENST00000260563 RHOP08100 348 aa21.78■■□□□ 1.08
RTCA-201ENST00000260563 HMGA1P17096 107 aaKnown RBP21.78■■□□□ 1.08
RTCA-201ENST00000260563 CDH5P33151 784 aaPredicted RBP21.78■■□□□ 1.08
RTCA-201ENST00000260563 MTHFRP42898 656 aa21.78■■□□□ 1.08
RTCA-201ENST00000260563 CENPCQ03188 943 aa21.78■■□□□ 1.08
RTCA-201ENST00000260563 PPP1R2P3Q6NXS1 205 aa21.78■■□□□ 1.08
RTCA-201ENST00000260563 PDZD4Q76G19 769 aaPredicted RBP21.78■■□□□ 1.08
RTCA-201ENST00000260563 DNAAF5Q86Y56 855 aa21.78■■□□□ 1.08
RTCA-201ENST00000260563 TMC8Q8IU68 726 aa21.78■■□□□ 1.08
RTCA-201ENST00000260563 CPA5Q8WXQ8 436 aa21.78■■□□□ 1.08
RTCA-201ENST00000260563 PPP1R13BQ96KQ4 1090 aa21.78■■□□□ 1.08
RTCA-201ENST00000260563 NOX5Q96PH1 765 aa21.78■■□□□ 1.08
RTCA-201ENST00000260563 PACSIN1Q9BY11 444 aa21.78■■□□□ 1.08
RTCA-201ENST00000260563 LRRC4Q9HBW1 653 aa21.78■■□□□ 1.08
RTCA-201ENST00000260563 A0A0U1RQJ8 604 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 FAM170AA1A519 330 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 ESPNB1AK53 854 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 H2AFZP0C0S5 128 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 NSFP46459 744 aaKnown RBP21.77■■□□□ 1.08
RTCA-201ENST00000260563 RGS7P49802 495 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 USP46P62068 366 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 LEXMQ3ZCV2 418 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 CYP4A22Q5TCH4 519 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 PMF1Q6P1K2 205 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 H2AFVQ71UI9 128 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 HS6ST3Q8IZP7 471 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 SCAMP5Q8TAC9 235 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 ATRIPQ8WXE1 791 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 KCTD13Q8WZ19 329 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 HSFY1Q96LI6 401 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 MYRFLQ96LU7 910 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 NECTIN4Q96NY8 510 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 TTLL2Q9BWV7 592 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 FBXO44Q9H4M3 255 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 ZNF334Q9HCZ1 680 aaPredicted RBP21.77■■□□□ 1.08
RTCA-201ENST00000260563 PRDM6Q9NQX0 595 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 ST7Q9NRC1 585 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 COMMD8Q9NX08 183 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 THEGQ9P2T0 379 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 INTUQ9ULD6 942 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 TFR2Q9UP52 801 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 USP15Q9Y4E8 981 aaPredicted RBP21.77■■□□□ 1.08
RTCA-201ENST00000260563 CLUHO75153 1309 aa21.77■■□□□ 1.08
RTCA-201ENST00000260563 RCCD1A6NED2 376 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 MBTPS2O43462 519 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 FGF19O95750 216 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 MYL4P12829 197 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 YWHAQP27348 245 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 EPHA5P54756 1037 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 GALCP54803 685 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 PDCLQ13371 301 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 RAB41Q5JT25 222 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 ZNF662Q6ZS27 426 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 SIX6OS1Q8N1H7 587 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 WDTC1Q8N5D0 677 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 SLITRK1Q96PX8 696 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 GCNAQ96QF7 691 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 LRRC3Q9BY71 257 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 WDR6Q9NNW5 1121 aaKnown RBP21.76■■□□□ 1.07
RTCA-201ENST00000260563 NUP210Q8TEM1 1887 aaPredicted RBP21.76■■□□□ 1.07
RTCA-201ENST00000260563 C5orf42Q9H799 3197 aa21.76■■□□□ 1.07
RTCA-201ENST00000260563 ANKRD62A6NC57 917 aa21.75■■□□□ 1.07
RTCA-201ENST00000260563 GOLGA6L9A6NEM1 432 aa21.75■■□□□ 1.07
RTCA-201ENST00000260563 PJA2O43164 708 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms