RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 TTC13Q8NBP0 860 aa9.1□□□□□ -0.95
CALCOCO2-201ENST00000258947 HHIPL1Q96JK4 782 aa9.1□□□□□ -0.95
CALCOCO2-201ENST00000258947 PWWP2AQ96N64 755 aa9.1□□□□□ -0.95
CALCOCO2-201ENST00000258947 PGLYRP2Q96PD5 576 aa9.1□□□□□ -0.95
CALCOCO2-201ENST00000258947 KCNK16Q96T55 309 aa9.1□□□□□ -0.95
CALCOCO2-201ENST00000258947 CCDC77Q9BR77 488 aa9.1□□□□□ -0.95
CALCOCO2-201ENST00000258947 LRRC19Q9H756 370 aa9.1□□□□□ -0.95
CALCOCO2-201ENST00000258947 SAYSD1Q9NPB0 183 aa9.1□□□□□ -0.95
CALCOCO2-201ENST00000258947 A0A1W2PQ45 241 aaPredicted RBP9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 A0A1W2PQY0 241 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 MGEA5O60502 916 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 USP17L7P0C7H9 530 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 CKBP12277 381 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 SKIP12755 728 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 CDH5P33151 784 aaPredicted RBP9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 NDUFV1P49821 464 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 SF3A3Q12874 501 aaKnown RBP eCLIP9.09□□□□□ -0.957e-7■■■□□ 18.1
CALCOCO2-201ENST00000258947 ZBTB6Q15916 424 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 TIGD5Q53EQ6 642 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 RAB6CQ53S08 254 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 TMC3Q7Z5M5 1100 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 BBOF1Q8ND07 529 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 SLAIN1Q8ND83 568 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 KBTBD7Q8WVZ9 684 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 RHOBTB2Q9BYZ6 727 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 RAB6CQ9H0N0 254 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 SEMA4AQ9H3S1 761 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 MRPL42Q9Y6G3 142 aaKnown RBP9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 hCG_1818297A0A087WSY0 165 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 CPB1P15086 417 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 DEUP1Q05D60 604 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 KYNUQ16719 465 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 BBS9Q3SYG4 887 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 BOLA3Q53S33 107 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 NPNTQ6UXI9 565 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 CTU1Q7Z7A3 348 aaKnown RBP9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 REM2Q8IYK8 340 aaPredicted RBP9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 FAXDC2Q96IV6 333 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 FERMT1Q9BQL6 677 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 TRAIPQ9BWF2 469 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 ULBP1Q9BZM6 244 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 SIK2Q9H0K1 926 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 KCNK9Q9NPC2 374 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 PCDHB7Q9Y5E2 793 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 A0A0U1RQF3 1178 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 MOXD2PA6NHM9 499 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 POC1B-GALNT4F8VUJ3 575 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 APOL1O14791 398 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 TRUB2O95900 331 aaKnown RBP9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 OR4Q2P0C623 313 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 TNFRSF8P28908 595 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 TKTP29401 623 aaKnown RBP9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 YWHAZP63104 245 aaKnown RBP9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 ROR1Q01973 937 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 YWHAHQ04917 246 aaPredicted RBP9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 TUSC3Q13454 348 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 LRRC38Q5VT99 294 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 NETO2Q8NC67 525 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 CXorf38Q8TB03 319 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 MCRS1Q96EZ8 462 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 PCED1BQ96HM7 432 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 ADAM33Q9BZ11 813 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 PRDM5Q9NQX1 630 aaPredicted RBP9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 DDIT4Q9NX09 232 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.09□□□□□ -0.959e-7■■□□□ 12.1
CALCOCO2-201ENST00000258947 AP4E1Q9UPM8 1137 aa9.09□□□□□ -0.95
CALCOCO2-201ENST00000258947 SCN1AP35498 2009 aa9.09□□□□□ -0.96
CALCOCO2-201ENST00000258947 ARHGEF37A1IGU5 675 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 C2CD4BA6NLJ0 364 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 NT5C1B-RDH14C9J2C7 533 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 KCNN4O15554 427 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 STAU1O95793 577 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 MOCS2O96007 188 aaPredicted RBP9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 ITIH2P19823 946 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 MCCD1P59942 119 aaPredicted RBP9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 GNGT1P63211 74 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 BFSP2Q13515 415 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 FAXCQ5TGI0 409 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 KIAA1841Q6NSI8 718 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 FUKQ8N0W3 1084 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 DBF4BQ8NFT6 615 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 SLC35F5Q8WV83 523 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 SCLYQ96I15 445 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 PPP1R10Q96QC0 940 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 RBM15Q96T37 977 aaKnown RBP eCLIP9.08□□□□□ -0.963e-6■□□□□ 8.8
CALCOCO2-201ENST00000258947 SNRNP25Q9BV90 132 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 DUSP16Q9BY84 665 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 NUDT5Q9UKK9 219 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 GRIN2DO15399 1336 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 SYF2O95926 243 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 NR1D1P20393 614 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 HSPA9P38646 679 aaKnown RBP9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 CDKN2BP42772 138 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 PTGIRP43119 386 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 COPS2P61201 443 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 GRIK3Q13003 919 aa9.08□□□□□ -0.96
CALCOCO2-201ENST00000258947 TAF12Q16514 161 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms