RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 SLC15A5A6NIM6 579 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 BEST1O76090 585 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 UBXN11Q5T124 520 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 CXCL17Q6UXB2 119 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 IGDCC3Q8IVU1 814 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 NKD2Q969F2 451 aaPredicted RBP13.71□□□□□ -0.21
THSD1-201ENST00000258613 CHMP6Q96FZ7 201 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 KLF6Q99612 283 aaPredicted RBP13.71□□□□□ -0.21
THSD1-201ENST00000258613 SLC45A1Q9Y2W3 748 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 NUP205Q92621 2012 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 EXOC1LA0A1B0GW35 172 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 PRPSAP2O60256 369 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 ITGAVP06756 1048 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 DPYSL3Q14195 570 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 SMAD1Q15797 465 aaKnown RBP13.71□□□□□ -0.21
THSD1-201ENST00000258613 PKN2Q16513 984 aaKnown RBP13.71□□□□□ -0.21
THSD1-201ENST00000258613 BBS9Q3SYG4 887 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 TWF2Q6IBS0 349 aaKnown RBP13.71□□□□□ -0.21
THSD1-201ENST00000258613 PPP1R2P3Q6NXS1 205 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 DARS2Q6PI48 645 aaKnown RBP13.71□□□□□ -0.21
THSD1-201ENST00000258613 POLNQ7Z5Q5 900 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 SLC35F5Q8WV83 523 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 DYDC1Q8WWB3 177 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 CNPY3Q9BT09 278 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 ASNSD1Q9NWL6 643 aa13.71□□□□□ -0.21
THSD1-201ENST00000258613 MRPL42Q9Y6G3 142 aaKnown RBP13.71□□□□□ -0.21
THSD1-201ENST00000258613 A0A1W2PPM1 405 aa13.71□□□□□ -0.22
THSD1-201ENST00000258613 NDUFV1P49821 464 aa13.71□□□□□ -0.22
THSD1-201ENST00000258613 GPX6P59796 221 aa13.71□□□□□ -0.22
THSD1-201ENST00000258613 COPS2P61201 443 aa13.71□□□□□ -0.22
THSD1-201ENST00000258613 TRIM32Q13049 653 aa13.71□□□□□ -0.22
THSD1-201ENST00000258613 PAN2Q504Q3 1202 aaKnown RBP13.71□□□□□ -0.22
THSD1-201ENST00000258613 PKDCCQ504Y2 493 aa13.71□□□□□ -0.22
THSD1-201ENST00000258613 FBXO47Q5MNV8 452 aa13.71□□□□□ -0.22
THSD1-201ENST00000258613 ALKAL1Q6UXT8 129 aa13.71□□□□□ -0.22
THSD1-201ENST00000258613 SMG8Q8ND04 991 aaKnown RBP13.71□□□□□ -0.22
THSD1-201ENST00000258613 FNIP1Q8TF40 1166 aa13.71□□□□□ -0.22
THSD1-201ENST00000258613 TMEM109Q9BVC6 243 aa13.71□□□□□ -0.22
THSD1-201ENST00000258613 WDR35Q9P2L0 1181 aa13.71□□□□□ -0.22
THSD1-201ENST00000258613 IPPQ9Y573 584 aa13.71□□□□□ -0.22
THSD1-201ENST00000258613 MBLAC1A4D2B0 266 aaPredicted RBP13.7□□□□□ -0.22
THSD1-201ENST00000258613 RRN3P2A6NIE6 340 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 KPNA7A9QM74 516 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 H7C0C1 242 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 GOLGA8RI6L899 631 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 GNL1P36915 607 aaPredicted RBP13.7□□□□□ -0.22
THSD1-201ENST00000258613 ATP5OP48047 213 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 HDAC4P56524 1084 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 KRT81Q14533 505 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 OSTM1Q86WC4 334 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 BEST2Q8NFU1 509 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 SPOCK2Q92563 424 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 CABS1Q96KC9 395 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 PAAF1Q9BRP4 392 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 SNRNP25Q9BV90 132 aaKnown RBP13.7□□□□□ -0.22
THSD1-201ENST00000258613 MAK16Q9BXY0 300 aaKnown RBP13.7□□□□□ -0.22
THSD1-201ENST00000258613 FGFR1OP2Q9NVK5 253 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 DRG1Q9Y295 367 aaKnown RBP13.7□□□□□ -0.22
THSD1-201ENST00000258613 TCP11X1B4DZS4 312 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 RASA4BC9J798 803 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 RASA4O43374 803 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 ADAM17P78536 824 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 DCAF4L1Q3SXM0 396 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 FBXW10Q5XX13 1052 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 MFSD5Q6N075 450 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 OTUD6BQ8N6M0 293 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 SERPINB12Q96P63 405 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 HESX1Q9UBX0 185 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.7□□□□□ -0.22
THSD1-201ENST00000258613 CLUHO75153 1309 aa13.7□□□□□ -0.22
THSD1-201ENST00000258613 SMIM35A0A1B0GVV1 85 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 CCDC189A1A4V9 331 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 A6NNZ2 444 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 I3L4J1 428 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 CAV1Q03135 178 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 LMNB2Q03252 620 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 TUBB8Q3ZCM7 444 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 FAM47CQ5HY64 1035 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 DRICH1Q6PGQ1 229 aaPredicted RBP13.69□□□□□ -0.22
THSD1-201ENST00000258613 PQLC3Q8N755 202 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 RNF169Q8NCN4 708 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 TRPV1Q8NER1 839 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 PCDH19Q8TAB3 1148 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 CNOT10Q9H9A5 744 aaKnown RBP13.69□□□□□ -0.22
THSD1-201ENST00000258613 PCDH9Q9HC56 1237 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 CHMP2BQ9UQN3 213 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 SDC4P31431 198 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 SLC6A3Q01959 620 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 HIF1AQ16665 826 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 GNASQ5JWF2 1037 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 CCDC185Q8N715 623 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 P3H4Q92791 437 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 FAM149B1Q96BN6 582 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 ROPN1BQ9BZX4 212 aaPredicted RBP13.69□□□□□ -0.22
THSD1-201ENST00000258613 DHX35Q9H5Z1 703 aaKnown RBP13.69□□□□□ -0.22
THSD1-201ENST00000258613 ROPN1Q9HAT0 212 aaPredicted RBP13.69□□□□□ -0.22
THSD1-201ENST00000258613 ETNK2Q9NVF9 386 aa13.69□□□□□ -0.22
THSD1-201ENST00000258613 PIH1D1Q9NWS0 290 aaKnown RBP13.69□□□□□ -0.22
THSD1-201ENST00000258613 XPO7Q9UIA9 1087 aaKnown RBP13.69□□□□□ -0.22
THSD1-201ENST00000258613 FARP1Q9Y4F1 1045 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms