RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 EFCAB10A6NFE3 127 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 ETS2P15036 469 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 HOXA13P31271 388 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 RFX5P48382 616 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 ZNF846Q147U1 533 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 HPS1Q92902 700 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 ELMO2Q96JJ3 720 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 TINF2Q9BSI4 451 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 TBC1D10AQ9BXI6 508 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 PACSIN1Q9BY11 444 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 FBXO28Q9NVF7 368 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 CIDEBQ9UHD4 219 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 STIP1P31948 543 aaKnown RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 KCNJ2P63252 427 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 MTFR1Q15390 333 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 TCHHL1Q5QJ38 904 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 TTC23LQ6PF05 361 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 SPATA18Q8TC71 538 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 CCDC126Q96EE4 140 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 RERGLQ9H628 205 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 ENTPD7Q9NQZ7 604 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 NDFIP2Q9NV92 336 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 AKT3Q9Y243 479 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 WDR37Q9Y2I8 494 aa13.6□□□□□ -0.23
PCDHGA3-201ENST00000253812 CCDC182A6NF36 153 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 ARIH2O95376 493 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 IL12AP29459 219 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 BLMHQ13867 455 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 FAM83EQ2M2I3 478 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 TMC3Q7Z5M5 1100 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 SPON1Q9HCB6 807 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 ABCB10Q9NRK6 738 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 STOML2Q9UJZ1 356 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 PCDHGA3Q9Y5H0 932 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 E9PBE3 544 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 BGNP21810 368 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 SPDYCQ5MJ68 293 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 PPP4R4Q6NUP7 873 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 CAMK1DQ8IU85 385 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 SLC30A5Q8TAD4 765 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 C18orf8Q96DM3 657 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 RSAD1Q9HA92 442 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 STON1Q9Y6Q2 735 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 DUSP10Q9Y6W6 482 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 TMEM131LA2VDJ0 1609 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 OPLAHO14841 1288 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 YWHABP31946 246 aaKnown RBP13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 FMO5P49326 533 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 DLG4P78352 724 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 KHDRBS2Q5VWX1 349 aaKnown RBP13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 DHFR2Q86XF0 187 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 THNSL1Q8IYQ7 743 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 ATG16L2Q8NAA4 619 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 COX4I2Q96KJ9 171 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 PAFAH2Q99487 392 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 UBXN6Q9BZV1 441 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 SPATA31A6Q5VVP1 1343 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 TK2O00142 265 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 CST8O60676 142 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 FAM20BO75063 409 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 NTSR2O95665 410 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 CHRNA5P30532 468 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 NPEPPSP55786 919 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 RAB15P59190 212 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 PDIA5Q14554 519 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 LPIN1Q14693 890 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 DDR2Q16832 855 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 SLC10A5Q5PT55 438 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 OTUD3Q5T2D3 398 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 C16orf62Q7Z3J2 963 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 SLC26A11Q86WA9 606 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 SP8Q8IXZ3 490 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 MICALL2Q8IY33 904 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 NSUN4Q96CB9 384 aaKnown RBP13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 WDR12Q9GZL7 423 aaKnown RBP13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 VAV3Q9UKW4 847 aa13.59□□□□□ -0.23
PCDHGA3-201ENST00000253812 VWDEQ8N2E2 1590 aa13.58□□□□□ -0.23
PCDHGA3-201ENST00000253812 WFS1O76024 890 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 FESP07332 822 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 CCNA2P20248 432 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 CDK16Q00536 496 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 NFYCQ13952 458 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 FAM98BQ52LJ0 330 aaKnown RBP13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 NET1Q7Z628 596 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 CCNJLQ8IV13 435 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 AGAP3Q96P47 875 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 CITED4Q96RK1 184 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 ZNF341Q9BYN7 854 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 GTF3C4Q9UKN8 822 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 ING4Q9UNL4 249 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 ZNF609O15014 1411 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 A0A087X0T9 212 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 FAM228BP0C875 321 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 RALAP11233 206 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 SKIV2L2P42285 1042 aaKnown RBP13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 ALDH1A3P47895 512 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 MAPK10P53779 464 aa13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 CSE1LP55060 971 aaKnown RBP13.58□□□□□ -0.24
PCDHGA3-201ENST00000253812 XIAPP98170 497 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms