RNA–Protein interactions for RNA: ENST00000252085.3

PCDHGA12-201, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA12, Length 4,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-201ENST00000252085 PYGBP11216 843 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 KCNA2P16389 499 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 PBX1P40424 430 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 PDAP1Q13442 181 aaKnown RBP13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 FBXO47Q5MNV8 452 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 C3orf20Q8ND61 904 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 THTPAQ9BU02 230 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 ASB7Q9H672 318 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 TRPC7Q9HCX4 862 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 GDF3Q9NR23 364 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 OLA1Q9NTK5 396 aaKnown RBP13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 WARS2Q9UGM6 360 aaKnown RBP13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 CPA4Q9UI42 421 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 ZNF263O14978 683 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 PPP1R11O60927 126 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 E2F6O75461 281 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 UBA1P22314 1058 aaKnown RBP13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 MED21Q13503 144 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 GRIK4Q16099 956 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 SH3TC2Q8TF17 1288 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 L3MBTL3Q96JM7 780 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 PAFAH2Q99487 392 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 PORCNQ9H237 461 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 PCDH9Q9HC56 1237 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 GBA2Q9HCG7 927 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 NSMCE4AQ9NXX6 385 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 UBAP1Q9NZ09 502 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 NDUFS3O75489 264 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 ANP32DO95626 131 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 SNHG28P0DPA3 235 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 TGM2P21980 687 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 TSEN2Q8NCE0 465 aaKnown RBP13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 ICA1LQ8NDH6 482 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 TMEM161BQ8NDZ6 487 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 CALML6Q8TD86 181 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 CYP39A1Q9NYL5 469 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 PDP2Q9P2J9 529 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 FAM8A1Q9UBU6 413 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 ITGA11Q9UKX5 1188 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 PEAK1Q9H792 1746 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 KBTBD13C9JR72 458 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 DPYSL4O14531 572 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 RIPK2O43353 540 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 ATP9AO75110 1047 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 ENO3P13929 434 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 HNRNPH3P31942 346 aaKnown RBP13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 ETFBP38117 255 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 FOXD4Q12950 439 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 SNX19Q92543 992 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 TRIM54Q9BYV2 358 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 DNAJC18Q9H819 358 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 ZNF446Q9NWS9 450 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 ATP11BQ9Y2G3 1177 aa13.17□□□□□ -0.3
PCDHGA12-201ENST00000252085 BCL9LQ86UU0 1499 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 KLHL2O95198 593 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 SYF2O95926 243 aaKnown RBP13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 F9P00740 461 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 CPA2P48052 419 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 ZNF844Q08AG5 666 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 ARSHQ5FYA8 562 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 C10orf120Q5SQS8 335 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 LRRC8EQ6NSJ5 796 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 LNX1Q8TBB1 728 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 LZICQ8WZA0 190 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 MTBPQ96DY7 904 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 PPP1R2P1Q96PQ5 205 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 SLITRK1Q96PX8 696 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 SH3GL2Q99962 352 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 C10orf88Q9H8K7 445 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 ZNF229Q9UJW7 825 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 LOC100653049A0A140TA62 436 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 GPR182O15218 404 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 KRT34O76011 436 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 ZNF268Q14587 947 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 SLC9A9Q8IVB4 645 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 MFN1Q8IWA4 741 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 NAALADL1Q9UQQ1 740 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 SDR42E2A6NKP2 422 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 PDHXO00330 501 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 TBC1D12O60347 775 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 KCNA4P22459 653 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 BST2Q10589 180 aaKnown RBP13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 RBBP7Q16576 425 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 TMEM259Q4ZIN3 620 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 FAM117BQ6P1L5 589 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 CATSPERGQ6ZRH7 1159 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 SIKE1Q9BRV8 207 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 GIMAP4Q9NUV9 329 aa13.16□□□□□ -0.3
PCDHGA12-201ENST00000252085 LACTBL1A8MY62 500 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 TGFB1I1O43294 461 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 ANXA9O76027 345 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 CALCAP01258 141 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 THP07101 528 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 CAPRIN1Q14444 709 aaKnown RBP13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 KRT33BQ14525 404 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 LBRQ14739 615 aaKnown RBP13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 SNX17Q15036 470 aa13.15□□□□□ -0.3
PCDHGA12-201ENST00000252085 TRADDQ15628 312 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms