RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 SCML2Q9UQR0 700 aa25.7■■□□□ 1.7
SDF2L1-201ENST00000248958 ZNF318Q5VUA4 2279 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 KIF11P52732 1056 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 USP4Q13107 963 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 MTF1Q14872 753 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 ZNF77Q15935 545 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 HECTD3Q5T447 861 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 IER5LQ5T953 404 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 ZNF852Q6ZMS4 543 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 TMEM105Q8N8V8 129 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 RBBP8NLQ8NC74 664 aaPredicted RBP25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 KREMEN1Q96MU8 473 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 GMIPQ9P107 970 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 APEX2Q9UBZ4 518 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 SIT1Q9Y3P8 196 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 MIA3Q5JRA6 1907 aa25.69■■□□□ 1.7
SDF2L1-201ENST00000248958 TPM2P07951 284 aa25.68■■□□□ 1.7
SDF2L1-201ENST00000248958 SLC9A1P19634 815 aa25.68■■□□□ 1.7
SDF2L1-201ENST00000248958 PSEN1P49768 467 aa25.68■■□□□ 1.7
SDF2L1-201ENST00000248958 BST2Q10589 180 aaKnown RBP25.68■■□□□ 1.7
SDF2L1-201ENST00000248958 PDGFRLQ15198 375 aa25.68■■□□□ 1.7
SDF2L1-201ENST00000248958 CNGA2Q16280 664 aa25.68■■□□□ 1.7
SDF2L1-201ENST00000248958 GOLGA7BQ2TAP0 167 aa25.68■■□□□ 1.7
SDF2L1-201ENST00000248958 MIIPQ5JXC2 388 aa25.68■■□□□ 1.7
SDF2L1-201ENST00000248958 DDX42Q86XP3 938 aaKnown RBP eCLIP25.68■■□□□ 1.7
SDF2L1-201ENST00000248958 FAM83CQ9BQN1 747 aa25.68■■□□□ 1.7
SDF2L1-201ENST00000248958 USP3Q9Y6I4 520 aa25.68■■□□□ 1.7
SDF2L1-201ENST00000248958 O00370 1275 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 XPO1O14980 1071 aaKnown RBP25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 NCAM2O15394 837 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 PON1P27169 355 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 ZNF132P52740 706 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 MYL5Q02045 173 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 HSP90AA4PQ58FG1 418 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 LCLAT1Q6UWP7 414 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 GPRIN1Q7Z2K8 1008 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 CCDC186Q7Z3E2 898 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 PIGZQ86VD9 579 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 TTC30AQ86WT1 665 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 PJA1Q8NG27 643 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 SH3RF2Q8TEC5 729 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 NAT10Q9H0A0 1025 aaKnown RBP25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 RNF38Q9H0F5 515 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 LTB4R2Q9NPC1 389 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 GKN1Q9NS71 199 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 PIAS3Q9Y6X2 628 aa25.67■■□□□ 1.7
SDF2L1-201ENST00000248958 RNF225M0QZC1 329 aaPredicted RBP25.66■■□□□ 1.7
SDF2L1-201ENST00000248958 LETM1O95202 739 aaPredicted RBP25.66■■□□□ 1.7
SDF2L1-201ENST00000248958 SETSIPP0DME0 302 aa25.66■■□□□ 1.7
SDF2L1-201ENST00000248958 MBL2P11226 248 aaPredicted RBP25.66■■□□□ 1.7
SDF2L1-201ENST00000248958 KPNA1P52294 538 aaPredicted RBP25.66■■□□□ 1.7
SDF2L1-201ENST00000248958 RAB41Q5JT25 222 aa25.66■■□□□ 1.7
SDF2L1-201ENST00000248958 CDKAL1Q5VV42 579 aa25.66■■□□□ 1.7
SDF2L1-201ENST00000248958 CAVIN1Q6NZI2 390 aaKnown RBP25.66■■□□□ 1.7
SDF2L1-201ENST00000248958 C11orf57Q6ZUT1 292 aaPredicted RBP25.66■■□□□ 1.7
SDF2L1-201ENST00000248958 ZFYVE19Q96K21 471 aa25.66■■□□□ 1.7
SDF2L1-201ENST00000248958 PI15O43692 258 aa25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 MAGEA9P43362 315 aa25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 TYRO3Q06418 890 aa25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 PDE4CQ08493 712 aa25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 KLHL40Q2TBA0 621 aa25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 ITPRIPL2Q3MIP1 535 aa25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 TADA2BQ86TJ2 420 aa25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 RALGPS2Q86X27 583 aaPredicted RBP25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 ZNF276Q8N554 614 aa25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 ANKRD20A12PQ8NF67 263 aa25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 OSCP1Q8WVF1 389 aa25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 FAM3CQ92520 227 aa25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 CYLDQ9NQC7 956 aa25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 CPQQ9Y646 472 aa25.65■■□□□ 1.7
SDF2L1-201ENST00000248958 LEFTY2O00292 366 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 PES1O00541 588 aaKnown RBP25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 COCHO43405 550 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 KRT5P13647 590 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 PLA2G4AP47712 749 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 IFNAR2P48551 515 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 AMPD2Q01433 879 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 RUNX3Q13761 415 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 UBXN2BQ14CS0 331 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 PKDCCQ504Y2 493 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 ARHGAP18Q8N392 663 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 KCTD13Q8WZ19 329 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 TFAP2BQ92481 460 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 CDK5RAP1Q96SZ6 601 aaKnown RBP25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 FOXQ1Q9C009 403 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 NACA2Q9H009 215 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 DUS2Q9NX74 493 aaKnown RBP25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 GTSE1Q9NYZ3 720 aa25.64■■□□□ 1.7
SDF2L1-201ENST00000248958 FAM170BA6NMN3 283 aa25.63■■□□□ 1.69
SDF2L1-201ENST00000248958 MED7O43513 233 aa25.63■■□□□ 1.69
SDF2L1-201ENST00000248958 GALR2O43603 387 aaPredicted RBP25.63■■□□□ 1.69
SDF2L1-201ENST00000248958 TLR5O60602 858 aa25.63■■□□□ 1.69
SDF2L1-201ENST00000248958 MEA1Q16626 185 aa25.63■■□□□ 1.69
SDF2L1-201ENST00000248958 KLHDC10Q6PID8 442 aa25.63■■□□□ 1.69
SDF2L1-201ENST00000248958 CCDC105Q8IYK2 499 aa25.63■■□□□ 1.69
SDF2L1-201ENST00000248958 RIN3Q8TB24 985 aa25.63■■□□□ 1.69
SDF2L1-201ENST00000248958 IRF2BPLQ9H1B7 796 aa25.63■■□□□ 1.69
SDF2L1-201ENST00000248958 CCSER2Q9H7U1 834 aa25.63■■□□□ 1.69
SDF2L1-201ENST00000248958 LRRC4Q9HBW1 653 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms