RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 CCND1P24385 295 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 ELK3P41970 407 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 TTLL4Q14679 1199 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 TMEM132DQ14C87 1099 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 PARP6Q2NL67 630 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 Q3C1V9 767 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 LCLAT1Q6UWP7 414 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 IGDCC3Q8IVU1 814 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 LINC01465Q8N7H1 131 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 ZNF398Q8TD17 642 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 STAMBPL1Q96FJ0 436 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 FDXACB1Q9BRP7 624 aaPredicted RBP22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 MIS12Q9H081 205 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 DICER1Q9UPY3 1922 aaKnown RBP22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 CXCL11O14625 94 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 CSDE1O75534 798 aaKnown RBP22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 NDST1P52848 882 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 IGBP1P78318 339 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 MTM1Q13496 603 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 SEPT7Q16181 437 aaKnown RBP22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 KYAT1Q16773 422 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 FAM183BPQ6ZVS7 135 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 ILDR2Q71H61 639 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 CPB2Q96IY4 423 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 ITGA11Q9UKX5 1188 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 KIAA1257Q9ULG3 409 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 TEX264Q9Y6I9 313 aa22.57■■□□□ 1.2
SH2D3A-201ENST00000245908 CHADO15335 359 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 STAU1O95793 577 aaKnown RBP22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 INSRRP14616 1297 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 PDGFRAP16234 1089 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 RAB6CQ53S08 254 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 FYB2Q5VWT5 728 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 NAIF1Q69YI7 327 aaPredicted RBP22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 OR6B2Q6IFH4 312 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 ZC3H18Q86VM9 953 aaKnown RBP22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 UTP4Q969X6 686 aaKnown RBP22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 RNF157Q96PX1 679 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 RAB6CQ9H0N0 254 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 VPS11Q9H270 941 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 SLC24A3Q9HC58 644 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 PDGFCQ9NRA1 345 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 L3MBTL1Q9Y468 752 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 E5RJQ4 531 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 C2CD2LO14523 706 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 WFS1O76024 890 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 ECM2O94769 699 aaPredicted RBP22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 IREB2P48200 963 aaKnown RBP22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 C15orf59Q2T9L4 293 aaPredicted RBP22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 ERO1BQ86YB8 467 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 AGGF1Q8N302 714 aaeCLIP22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 TTC39CQ8N584 583 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 SLC44A1Q8WWI5 657 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 INPP5DQ92835 1189 aa22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 GBA2Q9HCG7 927 aaPredicted RBP22.56■■□□□ 1.2
SH2D3A-201ENST00000245908 IQANK1A0A1B0GTG1 560 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 TCRBV9S1A1TA0A576 114 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 KBTBD13C9JR72 458 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 ADM5C9JUS6 153 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 PRPSAP2O60256 369 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 SPAG6O75602 509 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 RPSAP08865 295 aaKnown RBP22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 ARF4P18085 180 aaPredicted RBP22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 ACCSLQ4AC99 568 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 SLC45A4Q5BKX6 768 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 DPH6Q7L8W6 267 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 PIWIL1Q96J94 861 aaKnown RBP22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 TMEM237Q96Q45 408 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 SLC17A7Q9P2U7 560 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 TSPAN16Q9UKR8 245 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 C2CD2Q9Y426 696 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 PLXNA1Q9UIW2 1896 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 H7C0C1 242 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 GOLGA8RI6L899 631 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 MT-ND3P03897 115 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 PFKMP08237 780 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 TARSP26639 723 aaKnown RBP22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 ATP5OP48047 213 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 RBP5P82980 135 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 ATP11AP98196 1134 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 CCDC125Q86Z20 511 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 RTP4Q96DX8 246 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 KLF6Q99612 283 aaPredicted RBP22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 USP29Q9HBJ7 922 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 NOP53Q9NZM5 478 aaKnown RBP22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 PAK5Q9P286 719 aa22.55■■□□□ 1.2
SH2D3A-201ENST00000245908 DPYSL4O14531 572 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 T-ENOLP0DO92 83 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 ZNF200P98182 395 aaPredicted RBP22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 ARHGAP1Q07960 439 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 PTK7Q13308 1070 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 PDK2Q15119 407 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 NLRP9Q7RTR0 991 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 MAP7D3Q8IWC1 876 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 PNPLA8Q9NP80 782 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 DPP3Q9NY33 737 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 HAO1Q9UJM8 370 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 PIK3R2O00459 728 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 DHRS4L1P0CG22 281 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms