RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CMA1P23946 247 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 PCSK1P29120 753 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 RDXP35241 583 aaKnown RBP14.7□□□□□ -0.06
DDX39A-201ENST00000242776 LHX1P48742 406 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 POSTNQ15063 836 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 DUOXA1Q1HG43 343 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 RESP18Q5W5W9 173 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 RHBDF2Q6PJF5 856 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 C4orf50Q6ZRC1 276 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 CCDC73Q6ZRK6 1079 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 DENND5BQ6ZUT9 1274 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 HS2ST1Q7LGA3 356 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 ZNF720Q7Z2F6 126 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 NT5DC4Q86YG4 428 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 BRSK2Q8IWQ3 736 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 CRTAC1Q9NQ79 661 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 SIX4Q9UIU6 781 aa14.7□□□□□ -0.06
DDX39A-201ENST00000242776 R3HCC1Q9Y3T6 440 aaKnown RBP14.7□□□□□ -0.06
DDX39A-201ENST00000242776 TBC1D3BA6NDS4 549 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 GCNT3O95395 438 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 TCF3P15923 654 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 KIR2DL1P43626 348 aaPredicted RBP14.69□□□□□ -0.06
DDX39A-201ENST00000242776 PDE6CP51160 858 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 RBP5P82980 135 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 SCAPQ12770 1279 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 COL28A1Q2UY09 1125 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 MDH1BQ5I0G3 518 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 LY6G5CQ5SRR4 150 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 FAM171BQ6P995 826 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 SHC4Q6S5L8 630 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 SYCP3Q8IZU3 236 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 TOP6BLQ8N6T0 577 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 LRRC52Q8N7C0 313 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 FUBP3Q96I24 572 aaKnown RBP eCLIP14.69□□□□□ -0.06
DDX39A-201ENST00000242776 MMS19Q96T76 1030 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 ITGA11Q9UKX5 1188 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 PLXNB3Q9ULL4 1909 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 ZNF840PA6NDX5 716 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 F8VP50 259 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 GABRDO14764 452 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 TRIM24O15164 1050 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 AP5Z1O43299 807 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 SH3BP5O60239 455 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 ZIC2O95409 532 aaPredicted RBP14.69□□□□□ -0.06
DDX39A-201ENST00000242776 ADH1CP00326 375 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 IRF1P10914 325 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 CHRM1P11229 460 aaPredicted RBP14.69□□□□□ -0.06
DDX39A-201ENST00000242776 ABCD1P33897 745 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 MAGEA11P43364 429 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 CASP5P51878 434 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 ZNF33AQ06730 810 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 BYSLQ13895 437 aaKnown RBP14.69□□□□□ -0.06
DDX39A-201ENST00000242776 CXorf38Q8TB03 319 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 KBTBD7Q8WVZ9 684 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 HPDLQ96IR7 371 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 EPSTI1Q96J88 318 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 SPATA17Q96L03 361 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 ACCSQ96QU6 501 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 CBWD1Q9BRT8 395 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 CD93Q9NPY3 652 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 LMBRD1Q9NUN5 540 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 GDAP2Q9NXN4 497 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 CALCOCO1Q9P1Z2 691 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 CYP8B1Q9UNU6 501 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 EXOC7Q9UPT5 735 aa14.69□□□□□ -0.06
DDX39A-201ENST00000242776 PTPRJQ12913 1337 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 SLC9A3R1O14745 358 aaPredicted RBP14.68□□□□□ -0.06
DDX39A-201ENST00000242776 SERPINF2P08697 491 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 CD59P13987 128 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 PFKFB1P16118 471 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 GABRG2P18507 467 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 GRIA2P42262 883 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 CACNA2D1P54289 1103 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 SLC7A9P82251 487 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 TAF10Q12962 218 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 C10orf76Q5T2E6 689 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 L1TD1Q5T7N2 865 aaKnown RBP14.68□□□□□ -0.06
DDX39A-201ENST00000242776 USP49Q70CQ1 688 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 PROSER1Q86XN7 944 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 RGL4Q8IZJ4 473 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 ZNF513Q8N8E2 541 aaPredicted RBP14.68□□□□□ -0.06
DDX39A-201ENST00000242776 OR5B17Q8NGF7 314 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 PCED1BQ96HM7 432 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 ANKRD36BP1Q96IX9 119 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 FGFBP2Q9BYJ0 223 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 SLC6A17Q9H1V8 727 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 ST6GALNAC4Q9H4F1 302 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 CDH9Q9ULB4 789 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 PCDHB9Q9Y5E1 797 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 FREM2Q5SZK8 3169 aa14.68□□□□□ -0.06
DDX39A-201ENST00000242776 MYH10P35580 1976 aa14.67□□□□□ -0.06
DDX39A-201ENST00000242776 FAM237AA0A1B0GTK4 181 aa14.67□□□□□ -0.06
DDX39A-201ENST00000242776 A0A1B0GVL5 298 aa14.67□□□□□ -0.06
DDX39A-201ENST00000242776 H0Y626 953 aa14.67□□□□□ -0.06
DDX39A-201ENST00000242776 CLDN5O00501 218 aa14.67□□□□□ -0.06
DDX39A-201ENST00000242776 GADD45BO75293 160 aaPredicted RBP14.67□□□□□ -0.06
DDX39A-201ENST00000242776 PPP1R37O75864 691 aa14.67□□□□□ -0.06
DDX39A-201ENST00000242776 TRIM16O95361 564 aa14.67□□□□□ -0.06
DDX39A-201ENST00000242776 MBD3O95983 291 aa14.67□□□□□ -0.06
DDX39A-201ENST00000242776 HOXB2P14652 356 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms