RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 PABPN1LA6NDY0 278 aaKnown RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 TPST1O60507 370 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 NOS1APO75052 506 aaPredicted RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 GLRA3O75311 464 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 H6PDO95479 791 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 IGKV5-2P06315 115 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 P4HBP07237 508 aaKnown RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 FMO5P49326 533 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 GPSM2P81274 684 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 ANO4Q32M45 955 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 SLC7A5P1Q8MH63 180 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 ACAT2Q9BWD1 397 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 STN1Q9H668 368 aaKnown RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 GTF3C4Q9UKN8 822 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 WBP11Q9Y2W2 641 aaKnown RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 CEMIPQ8WUJ3 1361 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 FRMPD4Q14CM0 1322 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 KANSL1LA0AUZ9 987 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 ITM2AO43736 263 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 BMP10O95393 424 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 UTS2BQ765I0 119 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 SLC26A11Q86WA9 606 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 HM13Q8TCT9 377 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 RHOBTB2Q9BYZ6 727 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 NMUR2Q9GZQ4 415 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 CLEC4MQ9H2X3 399 aaPredicted RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 HIPK3Q9H422 1215 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 AVENQ9NQS1 362 aaPredicted RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 SERPINB13Q9UIV8 391 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 MEIS1O00470 390 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 S100A9P06702 114 aaKnown RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 MCAMP43121 646 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 UBAP2LQ14157 1087 aaKnown RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 ZC2HC1CQ53FD0 456 aaPredicted RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 STX19Q8N4C7 294 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 DCAF5Q96JK2 942 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 SRPK1Q96SB4 655 aaKnown RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 LRRC4BQ9NT99 713 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 ASAP1Q9ULH1 1129 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 PRPF19Q9UMS4 504 aaKnown RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 MRC2Q9UBG0 1479 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 ZNF862O60290 1169 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 LZTS3O60299 673 aaPredicted RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 H2AFYO75367 372 aaKnown RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 RARBP10826 455 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 CHKAP35790 457 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 SLC1A6P48664 564 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 BRDTQ58F21 947 aaPredicted RBP13.31□□□□□ -0.28
VAMP4-201ENST00000236192 ZNF354CQ86Y25 554 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 SFRP1Q8N474 314 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 TBC1D14Q9P2M4 693 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 CDH22Q9UJ99 828 aa13.31□□□□□ -0.28
VAMP4-201ENST00000236192 RPTORQ8N122 1335 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 UBE2Q2LH0YL09 131 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 PDE9AO76083 593 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 CRYZL1O95825 349 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 CDK4P11802 303 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 FUT4P22083 530 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 SLC9A3P48764 834 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 AKR1D1P51857 326 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 ZBED5Q49AG3 693 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 HDDC2Q7Z4H3 204 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 DCLK2Q8N568 766 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 FAM47BQ8NA70 645 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 TTC16Q8NEE8 873 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 RORBQ92753 470 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 TMEM117Q9H0C3 514 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 C8orf4Q9NR00 106 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 DCDC2Q9UHG0 476 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 EPHB6O15197 1021 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 MYL4P12829 197 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 TFDP2Q14188 446 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 TAF5Q15542 800 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 SPANXN2Q5MJ10 180 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 DNAAF5Q86Y56 855 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 CEP95Q96GE4 821 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 C11orf70Q9BRQ4 267 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 ILKAPQ9H0C8 392 aaPredicted RBP13.3□□□□□ -0.28
VAMP4-201ENST00000236192 ITGA11Q9UKX5 1188 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 EFR3BQ9Y2G0 817 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 AFG3L2Q9Y4W6 797 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 TSPAN4O14817 238 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 CYP26A1O43174 497 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
VAMP4-201ENST00000236192 MTRF1O75570 445 aaKnown RBP13.3□□□□□ -0.28
VAMP4-201ENST00000236192 PDE8BO95263 885 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 TFPTP0C1Z6 253 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 C6orf222P0C671 652 aaPredicted RBP13.3□□□□□ -0.28
VAMP4-201ENST00000236192 NELFEP18615 380 aaKnown RBP13.3□□□□□ -0.28
VAMP4-201ENST00000236192 CDH2P19022 906 aaPredicted RBP13.3□□□□□ -0.28
VAMP4-201ENST00000236192 CHRNDQ07001 517 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 CCDC85BQ15834 202 aaPredicted RBP13.3□□□□□ -0.28
VAMP4-201ENST00000236192 GJB7Q6PEY0 223 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 SLCO6A1Q86UG4 719 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 ELMOD2Q8IZ81 293 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 PRELID2Q8N945 189 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 CDH19Q9H159 772 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 EML4Q9HC35 981 aaKnown RBP13.3□□□□□ -0.28
VAMP4-201ENST00000236192 KIF17Q9P2E2 1029 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 ADAMTS12P58397 1594 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms