RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 PAX3P23760 479 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 ADH6P28332 368 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 ADORA2BP29275 332 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 HADHBP55084 474 aaKnown RBP10.28□□□□□ -0.76
TTC1-201ENST00000231238 PSMC1P62191 440 aaKnown RBP10.28□□□□□ -0.76
TTC1-201ENST00000231238 SNRPNP63162 240 aaKnown RBP10.28□□□□□ -0.76
TTC1-201ENST00000231238 AMPD2Q01433 879 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 TAP1Q03518 808 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 HIF1AQ16665 826 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 PAN2Q504Q3 1202 aaKnown RBP10.28□□□□□ -0.76
TTC1-201ENST00000231238 COX20Q5RI15 118 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 FAM43BQ6ZT52 329 aaPredicted RBP10.28□□□□□ -0.76
TTC1-201ENST00000231238 ANKRD33Q7Z3H0 272 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 TMEM86AQ8N2M4 240 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 PDCL2Q8N4E4 241 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 LRRC57Q8N9N7 239 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.28□□□□□ -0.76
TTC1-201ENST00000231238 RABGGTAQ92696 567 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 C18orf8Q96DM3 657 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 SCLYQ96I15 445 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 PBKQ96KB5 322 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 PLVAPQ9BX97 442 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 TLR10Q9BXR5 811 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 C11orf49Q9H6J7 331 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 PRDM5Q9NQX1 630 aaPredicted RBP10.28□□□□□ -0.76
TTC1-201ENST00000231238 TMEM161AQ9NX61 479 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 MIOSQ9NXC5 875 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 WDR35Q9P2L0 1181 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 CACNG4Q9UBN1 327 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 RNF14Q9UBS8 474 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 LCMT1Q9UIC8 334 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 L1RE1Q9UN81 338 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 COG5Q9UP83 839 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.28□□□□□ -0.76
TTC1-201ENST00000231238 ALG6Q9Y672 507 aa10.28□□□□□ -0.76
TTC1-201ENST00000231238 NBNO60934 754 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 MTA2O94776 668 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 HSPA1AP0DMV8 641 aaKnown RBP10.27□□□□□ -0.77
TTC1-201ENST00000231238 HSPA1BP0DMV9 641 aaKnown RBP10.27□□□□□ -0.77
TTC1-201ENST00000231238 FGFR1P11362 822 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 COL6A1P12109 1028 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 WARSP23381 471 aaKnown RBP10.27□□□□□ -0.77
TTC1-201ENST00000231238 CYP2C18P33260 490 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 GTF2F1P35269 517 aaKnown RBP eCLIP10.27□□□□□ -0.77
TTC1-201ENST00000231238 OR1G1P47890 313 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 LHX1P48742 406 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 AFF1P51825 1210 aaKnown RBP10.27□□□□□ -0.77
TTC1-201ENST00000231238 SPEM2Q0P670 501 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 TCEAL1Q15170 157 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 PLEKHG4Q58EX7 1191 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 CYP4A22Q5TCH4 519 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 SEL1L2Q5TEA6 688 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 WSCD1Q658N2 575 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 LCLAT1Q6UWP7 414 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 RAB44Q7Z6P3 723 aaPredicted RBP10.27□□□□□ -0.77
TTC1-201ENST00000231238 SYT9Q86SS6 491 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 NT5DC3Q86UY8 548 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 THEM5Q8N1Q8 247 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 C12orf29Q8N999 325 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 FEZF2Q8TBJ5 459 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 HASPINQ8TF76 798 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 UBE2Q2Q8WVN8 375 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 BTBD6Q96KE9 485 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 TOX2Q96NM4 488 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 SAP130Q9H0E3 1048 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 DDX43Q9NXZ2 648 aaKnown RBP10.27□□□□□ -0.77
TTC1-201ENST00000231238 DSEQ9UL01 958 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 USTQ9Y2C2 406 aa10.27□□□□□ -0.77
TTC1-201ENST00000231238 ENPP3O14638 875 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 TRAPPC3O43617 180 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 TADA3O75528 432 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 CLTBP09497 229 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 FAM163BP0C2L3 166 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 SETSIPP0DME0 302 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 COMTP21964 271 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 ACAT1P24752 427 aaKnown RBP10.26□□□□□ -0.77
TTC1-201ENST00000231238 PCSK1P29120 753 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 CDH5P33151 784 aaPredicted RBP10.26□□□□□ -0.77
TTC1-201ENST00000231238 SLC1A1P43005 524 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 GJA8P48165 433 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 BCAT1P54687 386 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 RNASE9P60153 205 aaKnown RBP10.26□□□□□ -0.77
TTC1-201ENST00000231238 PDCLQ13371 301 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 MAMLD1Q13495 774 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 CLUL1Q15846 466 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 UPP1Q16831 310 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 C11orf91Q3C1V1 193 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 OR6B2Q6IFH4 312 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 DCLRE1AQ6PJP8 1040 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 NECAB2Q7Z6G3 386 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 SLFN11Q7Z7L1 901 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 DNAJC5GQ8N7S2 189 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 B3GALNT2Q8NCR0 500 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 GSTCDQ8NEC7 633 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 DIS3LQ8TF46 1054 aaKnown RBP10.26□□□□□ -0.77
TTC1-201ENST00000231238 COG1Q8WTW3 980 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 ARMC5Q96C12 935 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 PAWRQ96IZ0 340 aaKnown RBP10.26□□□□□ -0.77
TTC1-201ENST00000231238 MCEEQ96PE7 176 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 NAP1L3Q99457 506 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms