RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 MAP4K3Q8IVH8 894 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 CHST12Q9NRB3 414 aa14.25□□□□□ -0.13
NFKB1-201ENST00000226574 TGM2P21980 687 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 EEF1DP29692 281 aaKnown RBP14.24□□□□□ -0.13
NFKB1-201ENST00000226574 AP3M2P53677 418 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 ZBTB46Q86UZ6 589 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 UNC45BQ8IWX7 931 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 ADAM32Q8TC27 787 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 DIS3LQ8TF46 1054 aaKnown RBP14.24□□□□□ -0.13
NFKB1-201ENST00000226574 PTPRN2Q92932 1015 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 CGRRF1Q99675 332 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 ARL8BQ9NVJ2 186 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 WRAP73Q9P2S5 460 aaPredicted RBP14.24□□□□□ -0.13
NFKB1-201ENST00000226574 LRCH1Q9Y2L9 728 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 NFAT5O94916 1531 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 RALBP11234 206 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 PTGER2P43116 358 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 PKNOX1P55347 436 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 TNFAIP2Q03169 654 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 MCL1Q07820 350 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 MYBPC2Q14324 1141 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 LY6KQ17RY6 165 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 HYIQ5T013 277 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 TLCD1Q96CP7 247 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 CCT7Q99832 543 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 SPON2Q9BUD6 331 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 ELP3Q9H9T3 547 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 C17orf75Q9HAS0 396 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 MYOZ2Q9NPC6 264 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 IPO11Q9UI26 975 aaKnown RBP14.24□□□□□ -0.13
NFKB1-201ENST00000226574 AMPD1P23109 780 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 FOXN2P32314 431 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 DSG3P32926 999 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 SPRP35270 261 aaPredicted RBP14.24□□□□□ -0.13
NFKB1-201ENST00000226574 TTLL4Q14679 1199 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 C16orf87Q6PH81 154 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 THAP11Q96EK4 314 aa14.24□□□□□ -0.13
NFKB1-201ENST00000226574 UMODL1Q5DID0 1318 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 TBC1D12O60347 775 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 PEX10O60683 326 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 E2F6O75461 281 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 SMNDC1O75940 238 aaKnown RBP eCLIP14.23□□□□□ -0.13
NFKB1-201ENST00000226574 HMGCRP04035 888 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 SUPT20HL2P0C7V6 817 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 ATP4AP20648 1035 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 DPYSL3Q14195 570 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 PDK4Q16654 411 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 PAN2Q504Q3 1202 aaKnown RBP14.23□□□□□ -0.13
NFKB1-201ENST00000226574 RNF220Q5VTB9 566 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 TMPRSS6Q8IU80 811 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 KCTD17Q8N5Z5 321 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 ZSCAN18Q8TBC5 510 aaPredicted RBP14.23□□□□□ -0.13
NFKB1-201ENST00000226574 PABPC5Q96DU9 382 aaKnown RBP14.23□□□□□ -0.13
NFKB1-201ENST00000226574 XRN1Q8IZH2 1706 aaKnown RBP14.23□□□□□ -0.13
NFKB1-201ENST00000226574 GSTA4O15217 222 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 SERPINB9P50453 376 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 KIZQ2M2Z5 673 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 CRELD2Q6UXH1 353 aaPredicted RBP14.23□□□□□ -0.13
NFKB1-201ENST00000226574 EXOC8Q8IYI6 725 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 SLITRK1Q96PX8 696 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 ATXN3LQ9H3M9 355 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 TAGLN3Q9UI15 199 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 SNX13Q9Y5W8 968 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 FAM208AQ9UK61 1670 aaKnown RBP14.23□□□□□ -0.13
NFKB1-201ENST00000226574 A0A0B4J269 797 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 WDR27A2RRH5 827 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 M0QYT0 321 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 CYB561D2O14569 222 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 PTGIRP43119 386 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 BAG6P46379 1132 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 CCNHP51946 323 aaPredicted RBP14.23□□□□□ -0.13
NFKB1-201ENST00000226574 JAM2P57087 298 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 GTF2BQ00403 316 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 ARHGAP18Q8N392 663 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 CYGBQ8WWM9 190 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 MKL1Q969V6 931 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 PIF1Q9H611 641 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 DENND2DQ9H6A0 471 aaPredicted RBP14.23□□□□□ -0.13
NFKB1-201ENST00000226574 CLIC5Q9NZA1 410 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 IL1RAPL1Q9NZN1 696 aa14.23□□□□□ -0.13
NFKB1-201ENST00000226574 RICTORQ6R327 1708 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 ARHGAP10A1A4S6 786 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 EDF1O60869 148 aaKnown RBP14.22□□□□□ -0.13
NFKB1-201ENST00000226574 SPAG6O75602 509 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 SNHG28P0DPA3 235 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 GFAPP14136 432 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 UBAP2LQ14157 1087 aaKnown RBP14.22□□□□□ -0.13
NFKB1-201ENST00000226574 EFHC1Q5JVL4 640 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 TTC7BQ86TV6 843 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 JOSD2Q8TAC2 188 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 ELMO2Q96JJ3 720 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 AVENQ9NQS1 362 aaPredicted RBP14.22□□□□□ -0.13
NFKB1-201ENST00000226574 SUN2Q9UH99 717 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 CPSF3Q9UKF6 684 aaKnown RBP14.22□□□□□ -0.13
NFKB1-201ENST00000226574 A0A087WZ62 844 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 ZC3H11AO75152 810 aaKnown RBP eCLIP14.22□□□□□ -0.13
NFKB1-201ENST00000226574 PSMG1O95456 288 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 CYP3A4P08684 503 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 NAMPTP43490 491 aa14.22□□□□□ -0.13
NFKB1-201ENST00000226574 PLK1P53350 603 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms