RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 TCOF1Q13428 1488 aaKnown RBP11.43□□□□□ -0.58
USP31-201ENST00000219689 VAC14Q08AM6 782 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 IQSEC1Q6DN90 963 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 TRIM72Q6ZMU5 477 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 ATG16L2Q8NAA4 619 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 TATDN2Q93075 761 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 RBBP8Q99708 897 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 PREBQ9HCU5 417 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 A1BGP04217 495 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 SHBGP04278 402 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 OCLNQ16625 522 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 CACTIN-AS1Q8N1I8 211 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 ZFP42Q96MM3 310 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 MARCH7Q9H992 704 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 A1CFQ9NQ94 594 aaKnown RBP11.43□□□□□ -0.58
USP31-201ENST00000219689 ACTR2P61160 394 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 TMEM26Q6ZUK4 368 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 IZUMO1Q8IYV9 350 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 BEST2Q8NFU1 509 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 BDH2Q9BUT1 245 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 DOCK11Q5JSL3 2073 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 PTPRTO14522 1441 aa11.43□□□□□ -0.58
USP31-201ENST00000219689 USP17L3A6NCW0 530 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 USP17L4A6NCW7 530 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 RPA3P35244 121 aaPredicted RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 KRT33BQ14525 404 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 ITPRIPL1Q6GPH6 555 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 USP17L1Q7RTZ2 530 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 PAGR1Q9BTK6 254 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 SEMA4AQ9H3S1 761 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 AKT3Q9Y243 479 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 TRIOBPQ9H2D6 2365 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 TTC37Q6PGP7 1564 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 RFX1P22670 979 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 POU1F1P28069 291 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 STAT3P40763 770 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 EIF4A1P60842 406 aaKnown RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 TCIRG1Q13488 830 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 NCOA4Q13772 614 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 CCSAPQ6IQ19 270 aaPredicted RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 CDC40O60508 579 aaKnown RBP eCLIP11.42□□□□□ -0.58
USP31-201ENST00000219689 DBTP11182 482 aaKnown RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 EIF3MQ7L2H7 374 aaKnown RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 KRT77Q7Z794 578 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 EID3Q8N140 333 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 TMEM35BQ8NCS4 154 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 RIBC2Q9H4K1 309 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 COMMD8Q9NX08 183 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 PLEKHG1Q9ULL1 1385 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 CCNFP41002 786 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 DYNLL1P63167 89 aaKnown RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 EFR3AQ14156 821 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 SHROOM1Q2M3G4 852 aaPredicted RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 SPOUT1Q5T280 376 aaKnown RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 BROXQ5VW32 411 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 RNF43Q68DV7 783 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 TTC7BQ86TV6 843 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 PEX5LQ8IYB4 626 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 UNC5CO95185 931 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 HOXA13P31271 388 aaPredicted RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 KCNQ3O43525 872 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 ATG7O95352 703 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 BMP10O95393 424 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 DHDDSQ86SQ9 333 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 TRMUO75648 421 aaKnown RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 C1DQ13901 141 aaKnown RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 C11orf63Q6NUN7 778 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 SLCO6A1Q86UG4 719 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 ACAT2Q9BWD1 397 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 PUS3Q9BZE2 481 aaKnown RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 PPP2R3BQ9Y5P8 575 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 GNB5O14775 395 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 SYNCRIPO60506 623 aaKnown RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 LIFRP42702 1097 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 DHRSXQ8N5I4 330 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 KAT2BQ92831 832 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 DCAF5Q96JK2 942 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 PRRG3Q9BZD7 231 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 WDR35Q9P2L0 1181 aa11.42□□□□□ -0.58
USP31-201ENST00000219689 MDC1Q14676 2089 aaKnown RBP11.42□□□□□ -0.58
USP31-201ENST00000219689 PPP1R3GB7ZBB8 358 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 RARGP13631 454 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 GTF2H1P32780 548 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 GUCY1A2P33402 732 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 ZIK1Q3SY52 487 aaPredicted RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 KIAA0408Q6ZU52 694 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 DGKHQ86XP1 1220 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 TSPAN17Q96FV3 270 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 RPF1Q9H9Y2 349 aaKnown RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 GDF3Q9NR23 364 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 AFF2P51816 1311 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 AREL1O15033 823 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 ITGA3P26006 1051 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 RPA1P27694 616 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 SEPHS1P49903 392 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 TNFAIP2Q03169 654 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 TFDP1Q14186 410 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 PLA2G4EQ3MJ16 856 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 SLC10A5Q5PT55 438 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 FAAH2Q6GMR7 532 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms