RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 TMEM9BQ9NQ34 198 aa16.76■□□□□ 0.27
NME3-201ENST00000219302 IL37Q9NZH6 218 aa16.76■□□□□ 0.27
NME3-201ENST00000219302 TBC1D14Q9P2M4 693 aa16.76■□□□□ 0.27
NME3-201ENST00000219302 CHORDC1Q9UHD1 332 aaPredicted RBP16.76■□□□□ 0.27
NME3-201ENST00000219302 EVLQ9UI08 416 aaPredicted RBP16.76■□□□□ 0.27
NME3-201ENST00000219302 A8MXQ7 604 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 TNFRSF10BO14763 440 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 COCHO43405 550 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 ALDH1A2O94788 518 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 MBL2P11226 248 aaPredicted RBP16.75■□□□□ 0.27
NME3-201ENST00000219302 CEACAM1P13688 526 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 DHPSP49366 369 aaPredicted RBP16.75■□□□□ 0.27
NME3-201ENST00000219302 TNNC1P63316 161 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 AMPD3Q01432 767 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 MAP7D1Q3KQU3 841 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 FAM26FQ5R3K3 315 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 LY6G5CQ5SRR4 150 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 DDX42Q86XP3 938 aaKnown RBP eCLIP16.75■□□□□ 0.27
NME3-201ENST00000219302 ETFBKMTQ8IXQ9 262 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 B3GALNT2Q8NCR0 500 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 OVCA2Q8WZ82 227 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 PIGKQ92643 395 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 DUSP9Q99956 384 aaKnown RBP16.75■□□□□ 0.27
NME3-201ENST00000219302 ARHGEF4Q9NR80 690 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 TMEM74BQ9NUR3 256 aa16.75■□□□□ 0.27
NME3-201ENST00000219302 MBD1Q9UIS9 605 aaPredicted RBP16.75■□□□□ 0.27
NME3-201ENST00000219302 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 C1QTNF9BB2RNN3 333 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 SPTLC2O15270 562 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 PPP6R2O75170 966 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 RTN3O95197 1032 aaPredicted RBP16.74■□□□□ 0.27
NME3-201ENST00000219302 ADH1CP00326 375 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 ZDHHC11BP0C7U3 371 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 C1QTNF9P0C862 333 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 ADH5P11766 374 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 ATICP31939 592 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 PI4KAP42356 2102 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 PTGER3P43115 390 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 CYP2J2P51589 502 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 ASIC1P78348 528 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 ZNF252P-AS1Q0IIN9 211 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 STK38Q15208 465 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 EOGTQ5NDL2 527 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 SHC4Q6S5L8 630 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 LPCAT2Q7L5N7 544 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 TTC30AQ86WT1 665 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 NELFCDQ8IXH7 590 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 C12orf56Q8IXR9 622 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 TMEFF1Q8IYR6 380 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 PDZD8Q8NEN9 1154 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 SCAMP5Q8TAC9 235 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 PLEKHO2Q8TD55 490 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 WHAMMQ8TF30 809 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 DHX58Q96C10 678 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 OTUB2Q96DC9 234 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 TMEM121BQ9BXQ6 578 aaPredicted RBP16.74■□□□□ 0.27
NME3-201ENST00000219302 VRTNQ9H8Y1 702 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 POLMQ9NP87 494 aaPredicted RBP16.74■□□□□ 0.27
NME3-201ENST00000219302 ZDHHC4Q9NPG8 344 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 TFIP11Q9UBB9 837 aaKnown RBP16.74■□□□□ 0.27
NME3-201ENST00000219302 NXF1Q9UBU9 619 aaKnown RBP16.74■□□□□ 0.27
NME3-201ENST00000219302 HCN2Q9UL51 889 aa16.74■□□□□ 0.27
NME3-201ENST00000219302 FAM92AA1XBS5 289 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.73■□□□□ 0.27
NME3-201ENST00000219302 STX6O43752 255 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 CDH8P55286 799 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 GAD2Q05329 585 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 IFRD2Q12894 506 aaPredicted RBP16.73■□□□□ 0.27
NME3-201ENST00000219302 TRPC3Q13507 836 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 BMT2Q1RMZ1 405 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 SPDYCQ5MJ68 293 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 HECTD3Q5T447 861 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 UNC13DQ70J99 1090 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 IQUBQ8NA54 791 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 FBXO32Q969P5 355 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 WBP2Q969T9 261 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 SYAP1Q96A49 352 aaPredicted RBP16.73■□□□□ 0.27
NME3-201ENST00000219302 CACNA1GO43497 2377 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 CACNA1EQ15878 2313 aa16.73■□□□□ 0.27
NME3-201ENST00000219302 UBE4BO95155 1302 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 HOXC11O43248 304 aaPredicted RBP16.72■□□□□ 0.27
NME3-201ENST00000219302 TOP3BO95985 862 aaKnown RBP16.72■□□□□ 0.27
NME3-201ENST00000219302 CASP1P29466 404 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 CASP4P49662 377 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 TUBP50607 506 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 CLDN10P78369 228 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 KDSRQ06136 332 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 FOXC1Q12948 553 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 TRIM61Q5EBN2 209 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 FAM35AQ86V20 835 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 TMEM25Q86YD3 366 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 SYT12Q8IV01 421 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 KDF1Q8NAX2 398 aaPredicted RBP16.72■□□□□ 0.27
NME3-201ENST00000219302 KCNV2Q8TDN2 545 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 SMYD3Q9H7B4 428 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 CCSER2Q9H7U1 834 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 COMMD8Q9NX08 183 aa16.72■□□□□ 0.27
NME3-201ENST00000219302 ZZEF1O43149 2961 aa16.71■□□□□ 0.27
NME3-201ENST00000219302 TBC1D3BA6NDS4 549 aa16.71■□□□□ 0.27
NME3-201ENST00000219302 MAP3K13O43283 966 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms