RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 LAMTOR4Q0VGL1 99 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 GADL1Q6ZQY3 521 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 SH2D5Q6ZV89 423 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 APBB1IPQ7Z5R6 666 aaPredicted RBP18.01■□□□□ 0.47
USB1-201ENST00000219281 CHSY1Q86X52 802 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 TEX9Q8N6V9 391 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 CEP120Q8N960 986 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 SKA1Q96BD8 255 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 TUBB6Q9BUF5 446 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 SPATC1LQ9H0A9 340 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 SDCBP2Q9H190 292 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 SLC24A3Q9HC58 644 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 TEX264Q9Y6I9 313 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 GYG2O15488 501 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 FAM155BO75949 473 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 DLDP09622 509 aaKnown RBP18.01■□□□□ 0.47
USB1-201ENST00000219281 ATP6V1C1P21283 382 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 SESN3P58005 492 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 FAM160B1Q5W0V3 765 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 ANO7Q6IWH7 933 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 RINLQ6ZS11 566 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 PRPF39Q86UA1 669 aaKnown RBP18.01■□□□□ 0.47
USB1-201ENST00000219281 CFAP36Q96G28 342 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 OTUD5Q96G74 571 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 PEBP4Q96S96 227 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 WDR35Q9P2L0 1181 aa18.01■□□□□ 0.47
USB1-201ENST00000219281 A0A0G2JLL6 359 aaPredicted RBP18■□□□□ 0.47
USB1-201ENST00000219281 DNAJC6O75061 913 aa18■□□□□ 0.47
USB1-201ENST00000219281 TGDSO95455 350 aa18■□□□□ 0.47
USB1-201ENST00000219281 EDNRBP24530 442 aa18■□□□□ 0.47
USB1-201ENST00000219281 TCF7P36402 384 aaPredicted RBP18■□□□□ 0.47
USB1-201ENST00000219281 KCNJ11Q14654 390 aa18■□□□□ 0.47
USB1-201ENST00000219281 SH3PXD2AQ5TCZ1 1133 aa18■□□□□ 0.47
USB1-201ENST00000219281 IER5Q5VY09 327 aa18■□□□□ 0.47
USB1-201ENST00000219281 PRRT2Q7Z6L0 340 aaPredicted RBP18■□□□□ 0.47
USB1-201ENST00000219281 ZBTB8OSQ8IWT0 167 aa18■□□□□ 0.47
USB1-201ENST00000219281 FAF2Q96CS3 445 aa18■□□□□ 0.47
USB1-201ENST00000219281 TWNKQ96RR1 684 aa18■□□□□ 0.47
USB1-201ENST00000219281 RSAD1Q9HA92 442 aa18■□□□□ 0.47
USB1-201ENST00000219281 HMGXB4Q9UGU5 601 aa18■□□□□ 0.47
USB1-201ENST00000219281 CNMDO75829 334 aa18■□□□□ 0.47
USB1-201ENST00000219281 MYL2P10916 166 aa18■□□□□ 0.47
USB1-201ENST00000219281 STIP1P31948 543 aaKnown RBP18■□□□□ 0.47
USB1-201ENST00000219281 PSEN1P49768 467 aa18■□□□□ 0.47
USB1-201ENST00000219281 CDH6P55285 790 aa18■□□□□ 0.47
USB1-201ENST00000219281 RAB6CQ53S08 254 aa18■□□□□ 0.47
USB1-201ENST00000219281 ZNF667Q5HYK9 610 aa18■□□□□ 0.47
USB1-201ENST00000219281 CDCA2Q69YH5 1023 aaPredicted RBP18■□□□□ 0.47
USB1-201ENST00000219281 C1orf228Q6PIY5 440 aa18■□□□□ 0.47
USB1-201ENST00000219281 NCAPG2Q86XI2 1143 aa18■□□□□ 0.47
USB1-201ENST00000219281 DNAJC9Q8WXX5 260 aa18■□□□□ 0.47
USB1-201ENST00000219281 RAB6CQ9H0N0 254 aa18■□□□□ 0.47
USB1-201ENST00000219281 ZFATQ9P243 1243 aa18■□□□□ 0.47
USB1-201ENST00000219281 A6NHS1 94 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 H7C0C1 242 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 MICAL2O94851 1124 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 PDHA1P08559 390 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 ATP5OP48047 213 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 SERPINB4P48594 390 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 KPNB1Q14974 876 aaKnown RBP17.99■□□□□ 0.47
USB1-201ENST00000219281 NOMO1Q15155 1222 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 TMEM132AQ24JP5 1023 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 TTC7BQ86TV6 843 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 CTAGE3PQ8IX95 158 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 SLC4A11Q8NBS3 891 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 LBHD1Q9BQE6 289 aaPredicted RBP17.99■□□□□ 0.47
USB1-201ENST00000219281 ADPGKQ9BRR6 497 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 ASCC2Q9H1I8 757 aaPredicted RBP17.99■□□□□ 0.47
USB1-201ENST00000219281 SMYD3Q9H7B4 428 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.99■□□□□ 0.47
USB1-201ENST00000219281 ASNSD1Q9NWL6 643 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 CNTN3Q9P232 1028 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 LOC285556D6RIA3 1793 aa17.99■□□□□ 0.47
USB1-201ENST00000219281 FAM237BA0A1B0GVD1 139 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 TRIM49D1C9J1S8 452 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 B4GALT5O43286 388 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 B4GALT4O60513 344 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 GCKP35557 465 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 GCLCP48506 637 aaPredicted RBP17.98■□□□□ 0.47
USB1-201ENST00000219281 CCDC6Q16204 474 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 FAM102AQ5T9C2 384 aaPredicted RBP17.98■□□□□ 0.47
USB1-201ENST00000219281 MPZL3Q6UWV2 235 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 CDHR3Q6ZTQ4 885 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 EEPD1Q7L9B9 569 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 LMNTD2Q8IXW0 634 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 TMEM192Q8IY95 271 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 VPS52Q8N1B4 723 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 PPM1NQ8N819 430 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 MCUR1Q96AQ8 359 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 MCRS1Q96EZ8 462 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 SRPK1Q96SB4 655 aaKnown RBP17.98■□□□□ 0.47
USB1-201ENST00000219281 ELOVL4Q9GZR5 314 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 SPON1Q9HCB6 807 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 RAB6BQ9NRW1 208 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 SIX4Q9UIU6 781 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.98■□□□□ 0.47
USB1-201ENST00000219281 E5RJQ4 531 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 PIK3R2O00459 728 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 COPEO14579 308 aa17.98■□□□□ 0.47
USB1-201ENST00000219281 UPP2O95045 317 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms