RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 CXCL9Q07325 125 aa23.07■■□□□ 1.28
HTATSF1-201ENST00000218364 TMEM154Q6P9G4 183 aa23.07■■□□□ 1.28
HTATSF1-201ENST00000218364 CDHR3Q6ZTQ4 885 aa23.07■■□□□ 1.28
HTATSF1-201ENST00000218364 TRIM42Q8IWZ5 723 aa23.07■■□□□ 1.28
HTATSF1-201ENST00000218364 SLC4A11Q8NBS3 891 aa23.07■■□□□ 1.28
HTATSF1-201ENST00000218364 PCYT2Q99447 389 aa23.07■■□□□ 1.28
HTATSF1-201ENST00000218364 FRMD8Q9BZ67 464 aaPredicted RBP23.07■■□□□ 1.28
HTATSF1-201ENST00000218364 NMUR2Q9GZQ4 415 aa23.07■■□□□ 1.28
HTATSF1-201ENST00000218364 NRBP2Q9NSY0 501 aa23.07■■□□□ 1.28
HTATSF1-201ENST00000218364 USP18Q9UMW8 372 aa23.07■■□□□ 1.28
HTATSF1-201ENST00000218364 TTLL3Q9Y4R7 772 aa23.07■■□□□ 1.28
HTATSF1-201ENST00000218364 PPME1Q9Y570 386 aa23.07■■□□□ 1.28
HTATSF1-201ENST00000218364 CAPN14A8MX76 684 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 E5RJQ4 531 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 AP1B1Q10567 949 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 STXBP2Q15833 593 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 DARS2Q6PI48 645 aaKnown RBP23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 PRPF39Q86UA1 669 aaKnown RBP23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 HSPH1Q92598 858 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 MCRS1Q96EZ8 462 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 SPATS2LQ9NUQ6 558 aaKnown RBP23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 ZNF212Q9UDV6 495 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 C2orf71A6NGG8 1288 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 RNF8O76064 485 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 FESP07332 822 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 TFAMQ00059 246 aaKnown RBP23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 CDK18Q07002 472 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 ANGEL2Q5VTE6 544 aaKnown RBP23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 EP400NLQ6ZTU2 488 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 NIM1KQ8IY84 436 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 PRPF31Q8WWY3 499 aaKnown RBP23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 APBB2Q92870 758 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 TEX13BQ9BXU2 312 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 CALN1Q9BXU9 219 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 MKS1Q9NXB0 559 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 ASB3Q9Y575 518 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 GABRB2P47870 512 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 ZRSR2Q15696 482 aaKnown RBP23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 STMN2Q93045 179 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 C12orf42Q96LP6 360 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 PLLPQ9Y342 182 aa23.06■■□□□ 1.28
HTATSF1-201ENST00000218364 SPDYE5A6NIY4 337 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 TRIM49D1C9J1S8 452 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 SNRPAP09012 282 aaKnown RBP23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 SP100P23497 879 aaPredicted RBP23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 CCNFP41002 786 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 HSF5Q4G112 596 aaPredicted RBP23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 NPNTQ6UXI9 565 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 TMPRSS6Q8IU80 811 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 BCO2Q9BYV7 579 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 IQCGQ9H095 443 aaKnown RBP23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 PHIPQ8WWQ0 1821 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 F8W8V4 182 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 AHCYL1O43865 530 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 KRT37O76014 449 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 UPP2O95045 317 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 PGM1P36871 562 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 YWHAZP63104 245 aaKnown RBP23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 MXRA7P84157 204 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 FAF2Q96CS3 445 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 VCXQ9H320 206 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 USP29Q9HBJ7 922 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 ASNSD1Q9NWL6 643 aa23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 PPP1R1BQ9UD71 204 aaPredicted RBP23.05■■□□□ 1.28
HTATSF1-201ENST00000218364 TRDMT1O14717 391 aaKnown RBP23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 B4GALT4O60513 344 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 TNNC2P02585 160 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 PRKCHP24723 683 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 FAM47CQ5HY64 1035 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 ALYREFQ86V81 257 aaKnown RBP23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 CCDC110Q8TBZ0 833 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 RTP4Q96DX8 246 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 PEBP4Q96S96 227 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 PAK5Q9P286 719 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 ARMCX1Q9P291 453 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 AVILO75366 819 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 CALRP27797 417 aaKnown RBP23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 TFDP2Q14188 446 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 ZC3H18Q86VM9 953 aaKnown RBP23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 ZNF280CQ8ND82 737 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 UCMAQ8WVF2 138 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 AS3MTQ9HBK9 375 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 SIRPGQ9P1W8 387 aa23.04■■□□□ 1.28
HTATSF1-201ENST00000218364 I3L4J1 428 aa23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 HIRAP54198 1017 aaPredicted RBP23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 MMRN1Q13201 1228 aa23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 ATG16L1Q676U5 607 aa23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 CYP4V2Q6ZWL3 525 aaPredicted RBP23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 PDCD7Q8N8D1 485 aaKnown RBP23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 PPFIBP2Q8ND30 876 aa23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 NXF1Q9UBU9 619 aaKnown RBP23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 SSC5DA1L4H1 1573 aa23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 GOLGB1Q14789 3259 aaKnown RBP23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 ENO4A6NNW6 628 aa23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 RAP1GAPP47736 663 aa23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 BST1Q10588 318 aa23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 THOC5Q13769 683 aaKnown RBP23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 RCN2Q14257 317 aa23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 C11orf91Q3C1V1 193 aa23.03■■□□□ 1.28
HTATSF1-201ENST00000218364 LGSNQ5TDP6 509 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms