RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 CNGA2Q16280 664 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 ANKRD20A8PQ5CZ79 823 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 CAPRIN2Q6IMN6 1127 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 TTC27Q6P3X3 843 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 TTC39CQ8N584 583 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 APPL2Q8NEU8 664 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 OR2W6PQ8NHA6 318 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 RBM41Q96IZ5 413 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 ZNF560Q96MR9 790 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 LPIN3Q9BQK8 851 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 CALN1Q9BXU9 219 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 OSBPL7Q9BZF2 842 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 NEUROG2Q9H2A3 272 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 TRPV5Q9NQA5 729 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 DNAJC17Q9NVM6 304 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 WDR35Q9P2L0 1181 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 ST3GAL5Q9UNP4 418 aa9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 TRIP12Q14669 1992 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-201ENST00000216605 KPNA7A9QM74 516 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 FAM155AB1AL88 458 aaPredicted RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 HAS3O00219 553 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 HMGCRP04035 888 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 ASGR1P07306 291 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 MRPS6P82932 125 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 SP3Q02447 781 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 LACTB2Q53H82 288 aaPredicted RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 PPP1R26Q5T8A7 1209 aaPredicted RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 C9orf57Q5W0N0 161 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 GDF6Q6KF10 455 aaPredicted RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 KCTD6Q8NC69 237 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 RAET1EQ8TD07 263 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 GRK7Q8WTQ7 553 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 DDX27Q96GQ7 796 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 RUNDC3BQ96NL0 473 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 NGRNQ9NPE2 291 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 SLC12A6Q9UHW9 1150 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 CYTH4Q9UIA0 394 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 INPP5FQ9Y2H2 1132 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 E5RJQ4 531 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 DNM1LO00429 736 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 SEPT4O43236 478 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 TJP3O95049 919 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 GHRP10912 638 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 PDGFRAP16234 1089 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 SCTRP47872 440 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 TAF6P49848 677 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 POU5F1Q01860 360 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 OGDHQ02218 1023 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 CACNB2Q08289 660 aaPredicted RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 XRCC4Q13426 336 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 PCBP1Q15365 356 aaKnown RBP eCLIP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 KCNA10Q16322 511 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 RCOR2Q8IZ40 523 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 ANKS4BQ8N8V4 417 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 FBXO25Q8TCJ0 367 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 LPPQ93052 612 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 BHMTQ93088 406 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 MED10Q9BTT4 135 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 MAK16Q9BXY0 300 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 LHX5Q9H2C1 402 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 RETREG1Q9H6L5 497 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 CNOT10Q9H9A5 744 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 DNAAF2Q9NVR5 837 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 CACNG4Q9UBN1 327 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 TRPV2Q9Y5S1 764 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 C5orf60A6NFR6 353 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 FSCN2O14926 492 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 HCRTO43612 131 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 LCP1P13796 627 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 CCND3P30281 292 aaPredicted RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 TM4SF4P48230 202 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 PAPOLAP51003 745 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 ZNF844Q08AG5 666 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 NOGQ13253 232 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 DEFB115Q30KQ5 88 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 MFSD7Q6UXD7 560 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 FAM228AQ86W67 206 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 RNF168Q8IYW5 571 aaPredicted RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 ZDHHC14Q8IZN3 488 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 TAB3Q8N5C8 712 aaPredicted RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 EXD1Q8NHP7 514 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 RAPGEF5Q92565 580 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 CENPOQ9BU64 300 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 HAUS2Q9NVX0 235 aa9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 NOVA2Q9UNW9 492 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 R3HDM2Q9Y2K5 976 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-201ENST00000216605 SIGLEC16A6NMB1 481 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 H0YGN5 161 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 ATF2P15336 505 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 ACAT1P24752 427 aaKnown RBP9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 MLH1P40692 756 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 RPL21P46778 160 aaKnown RBP9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 SCNN1BP51168 640 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 LONRF1Q17RB8 773 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 DSTYKQ6XUX3 929 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 RFX6Q8HWS3 928 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 SCUBE3Q8IX30 993 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 RSPH1Q8WYR4 309 aa9.3□□□□□ -0.92
MTHFD1-201ENST00000216605 FAM149B1Q96BN6 582 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms