RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 ZBED1O96006 694 aa21.24■□□□□ 0.99
RHBDD3-201ENST00000216085 CYP1A1P04798 512 aaPredicted RBP21.24■□□□□ 0.99
RHBDD3-201ENST00000216085 PSEN1P49768 467 aa21.24■□□□□ 0.99
RHBDD3-201ENST00000216085 CLEC16AQ2KHT3 1053 aa21.24■□□□□ 0.99
RHBDD3-201ENST00000216085 CCDC186Q7Z3E2 898 aa21.24■□□□□ 0.99
RHBDD3-201ENST00000216085 SUSD6Q92537 303 aa21.24■□□□□ 0.99
RHBDD3-201ENST00000216085 ZNF334Q9HCZ1 680 aaPredicted RBP21.24■□□□□ 0.99
RHBDD3-201ENST00000216085 TLR8Q9NR97 1041 aaKnown RBP21.24■□□□□ 0.99
RHBDD3-201ENST00000216085 USP3Q9Y6I4 520 aa21.24■□□□□ 0.99
RHBDD3-201ENST00000216085 SSU72P8A0A1W2PR75 194 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 RPL34P49207 117 aaKnown RBP21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 CDK17Q00537 523 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 CENPCQ03188 943 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 GOLGA8FQ08AF8 430 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 GOLGA8DPQ0D2H9 430 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 TMEM110Q86TL2 294 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 SCML4Q8N228 414 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 SYT11Q9BT88 431 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 LRRC3Q9BY71 257 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 ULBP1Q9BZM6 244 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 A0A1W2PRU2 124 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 E5RJQ4 531 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 USP17L7P0C7H9 530 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 DDX6P26196 483 aaKnown RBP eCLIP21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 NTHL1P78549 312 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 PTCRAQ6ISU1 281 aaPredicted RBP21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 GET4Q7L5D6 327 aaPredicted RBP21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 MON1AQ86VX9 555 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 ZDHHC17Q8IUH5 632 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 WDTC1Q8N5D0 677 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 CPA5Q8WXQ8 436 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 IRGQQ8WZA9 623 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 CCDC42Q96M95 316 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 CPXM1Q96SM3 734 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 TRIM62Q9BVG3 475 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 SLITRK6Q9H5Y7 841 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 ARHGAP20Q9P2F6 1191 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 CYTH4Q9UIA0 394 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 STRIP2Q9ULQ0 834 aa21.23■□□□□ 0.99
RHBDD3-201ENST00000216085 C2orf16Q68DN1 1984 aa21.22■□□□□ 0.99
RHBDD3-201ENST00000216085 ABL1P00519 1130 aa21.22■□□□□ 0.99
RHBDD3-201ENST00000216085 UNGP13051 313 aaPredicted RBP21.22■□□□□ 0.99
RHBDD3-201ENST00000216085 PRSS36Q5K4E3 855 aa21.22■□□□□ 0.99
RHBDD3-201ENST00000216085 TOGARAM2Q6ZUX3 1019 aa21.22■□□□□ 0.99
RHBDD3-201ENST00000216085 TADA2BQ86TJ2 420 aa21.22■□□□□ 0.99
RHBDD3-201ENST00000216085 C18orf8Q96DM3 657 aa21.22■□□□□ 0.99
RHBDD3-201ENST00000216085 IL21Q9HBE4 155 aa21.22■□□□□ 0.99
RHBDD3-201ENST00000216085 GREB1Q4ZG55 1949 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 GRXCR2A6NFK2 248 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 PIK3R2O00459 728 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 AKR1B10O60218 316 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 F11P03951 625 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 CALB1P05937 261 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 GZMAP12544 262 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 MAPK8IP2Q13387 824 aaPredicted RBP21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 PTPN20Q4JDL3 420 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 PM20D1Q6GTS8 502 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 WDR59Q6PJI9 974 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 CDK5RAP1Q96SZ6 601 aaKnown RBP21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 PCDHB18PQ96TA0 734 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 POMKQ9H5K3 350 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 GMIPQ9P107 970 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 ADAMTS1Q9UHI8 967 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 ZFP37Q9Y6Q3 630 aaPredicted RBP21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 XIRP2A4UGR9 3374 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 PRUNE2Q8WUY3 3088 aa21.21■□□□□ 0.99
RHBDD3-201ENST00000216085 SOBPA7XYQ1 873 aa21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 PLEKP08567 350 aaPredicted RBP21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 RALAP11233 206 aa21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 EIF4A3P38919 411 aaKnown RBP21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 SMAD2Q15796 467 aaKnown RBP21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 SLC5A9Q2M3M2 681 aa21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 GAREM2Q75VX8 874 aa21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 OTOP3Q7RTS5 596 aa21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 SHKBP1Q8TBC3 707 aa21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 ACSF2Q96CM8 615 aaPredicted RBP21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 CDH22Q9UJ99 828 aa21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 NAGPAQ9UK23 515 aa21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 NR2E1Q9Y466 385 aa21.2■□□□□ 0.99
RHBDD3-201ENST00000216085 NRDCO43847 1150 aa21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 PFKLP17858 780 aa21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 MMP8P22894 467 aa21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 DAOAP59103 153 aa21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 MRPS5P82675 430 aaKnown RBP21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 TFF2Q03403 129 aa21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 ACAD10Q6JQN1 1059 aa21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 PHF13Q86YI8 300 aaPredicted RBP21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 SCUBE3Q8IX30 993 aa21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 ATXN2LQ8WWM7 1075 aaKnown RBP21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 TRIM11Q96F44 468 aa21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 NACA2Q9H009 215 aa21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 NHEJ1Q9H9Q4 299 aaPredicted RBP21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 PRDM6Q9NQX0 595 aa21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 GDE1Q9NZC3 331 aa21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 ADAM22Q9P0K1 906 aa21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 WDR35Q9P2L0 1181 aa21.2■□□□□ 0.98
RHBDD3-201ENST00000216085 MYO16Q9Y6X6 1858 aa21.19■□□□□ 0.98
RHBDD3-201ENST00000216085 ZNF840PA6NDX5 716 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms