RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 SART1O43290 800 aaKnown RBP16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 LILRB3O75022 631 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 HSF2BPO75031 334 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 USP17L7P0C7H9 530 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 CTSAP10619 480 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 HAPLN1P10915 354 aaPredicted RBP16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 CTNNA1P35221 906 aaKnown RBP16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 PEX5P50542 639 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 DDR2Q16832 855 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 CC2D1AQ6P1N0 951 aaPredicted RBP16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 ZNF461Q8TAF7 563 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 KRT35Q92764 455 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 PBKQ96KB5 322 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 CNPY3Q9BT09 278 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.72■□□□□ 0.275e-6■■■■□ 19.5
SNRPD3-201ENST00000215829 SLC27A5Q9Y2P5 690 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 PATJQ8NI35 1801 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 GRXCR1A8MXD5 290 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 DPYSL4O14531 572 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 RIOK3O14730 519 aaKnown RBP16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 ABLIM3O94929 683 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 DNAJB2P25686 324 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 CTNNB1P35222 781 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 SLC5A3P53794 718 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 YWHAZP63104 245 aaKnown RBP16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 DUSP4Q13115 394 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 WHAMMP3Q1A5X7 153 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 CCDC14Q49A88 953 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 DAB2IPQ5VWQ8 1189 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 TPGS2Q68CL5 300 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 CREG2Q8IUH2 290 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 TTC9BQ8N6N2 239 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 SCAMP5Q8TAC9 235 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 IRGQQ8WZA9 623 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 ALG3Q92685 438 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 CRISPLD1Q9H336 500 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 FNIP2Q9P278 1114 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 AFF4Q9UHB7 1163 aaKnown RBP16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 LZTS1Q9Y250 596 aa16.72■□□□□ 0.27
SNRPD3-201ENST00000215829 MYOGP15173 224 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 SDC4P31431 198 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 GPR15P49685 360 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 TAS2R40P59535 323 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 CREMQ03060 361 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 RAB33AQ14088 237 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 MGAT5BQ3V5L5 792 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 FAM109BQ6ICB4 259 aaPredicted RBP16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 BHLHA9Q7RTU4 235 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 RHOT1Q8IXI2 618 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 NUP93Q8N1F7 819 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 ARFGAP1Q8N6T3 406 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 AUTS2Q8WXX7 1259 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 FAM149B1Q96BN6 582 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 CFAP57Q96MR6 1250 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 DDX23Q9BUQ8 820 aaKnown RBP16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 RXFP1Q9HBX9 757 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 HSFX1Q9UBD0 423 aa16.71■□□□□ 0.27
SNRPD3-201ENST00000215829 YJEFN3A6XGL0 299 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 E7ENQ6 273 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 C5orf67F2Z3F1 127 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 PSTPIP1O43586 416 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 RNF8O76064 485 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 ATF2P15336 505 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 MATKP42679 507 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 SSR1P43307 286 aaKnown RBP16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 MARCKSL1P49006 195 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 TUFMP49411 452 aaKnown RBP16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 SDHAF4Q5VUM1 108 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 CAPZA3Q96KX2 299 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 SPATA17Q96L03 361 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 SLC2A13Q96QE2 648 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 SEPT5Q99719 369 aaPredicted RBP16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 CARD9Q9H257 536 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 POPDC2Q9HBU9 364 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 RNF14Q9UBS8 474 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 PLXNA4Q9HCM2 1894 aa16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 LAMA2P24043 3122 aaKnown RBP16.7■□□□□ 0.26
SNRPD3-201ENST00000215829 LRCH4O75427 683 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 DAB1O75553 588 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 SOAT2O75908 522 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 DESP17661 470 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 PCK1P35558 622 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 PTPN9P43378 593 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 RWDD2BP57060 319 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 RPL10AP62906 217 aaKnown RBP16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 C15orf59Q2T9L4 293 aaPredicted RBP16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 LRRC38Q5VT99 294 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 DCAF12L1Q5VU92 463 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 HFE2Q6ZVN8 426 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 DEFB106AQ8N104 65 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 GDF15Q99988 308 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 C17orf80Q9BSJ5 609 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 C11orf84Q9BUA3 381 aaPredicted RBP16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 UBE2OQ9C0C9 1292 aaKnown RBP16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 FBXO44Q9H4M3 255 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 ALG13Q9NP73 1137 aaKnown RBP16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 PCDHA11Q9Y5I1 949 aa16.69■□□□□ 0.26
SNRPD3-201ENST00000215829 TEX28O15482 410 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms