RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 BBS7Q8IWZ6 715 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 RNF148Q8N7C7 305 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 POC5Q8NA72 575 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 CKAP2Q8WWK9 683 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 C19orf60Q96EN9 201 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 RPRD1BQ9NQG5 326 aaKnown RBP10.79□□□□□ -0.68
VCL-201ENST00000211998 RNF181Q9P0P0 153 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 POLIQ9UNA4 740 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 HEATR9A2RTY3 570 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 PDE9AO76083 593 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 LPIN1Q14693 890 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 STILQ15468 1287 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 QPCTQ16769 361 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 FIGNQ5HY92 759 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 SEL1L3Q68CR1 1132 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 LDHDQ86WU2 507 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 LPAR1Q92633 364 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 PTPRN2Q92932 1015 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 TNIP3Q96KP6 325 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 RBBP8Q99708 897 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 APOL4Q9BPW4 351 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 MBD2Q9UBB5 411 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 HPSEQ9Y251 543 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 KDM6AO15550 1401 aaPredicted RBP10.79□□□□□ -0.68
VCL-201ENST00000211998 ADGRB3O60242 1522 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 A8MUI8 341 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 NPTXRO95502 500 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 ITGA9Q13797 1035 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 MXD4Q14582 209 aaPredicted RBP10.79□□□□□ -0.68
VCL-201ENST00000211998 TRIM71Q2Q1W2 868 aaKnown RBP10.79□□□□□ -0.68
VCL-201ENST00000211998 TRIQKQ629K1 86 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 DHDDSQ86SQ9 333 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 ZBTB46Q86UZ6 589 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 ZSCAN18Q8TBC5 510 aaPredicted RBP10.79□□□□□ -0.68
VCL-201ENST00000211998 RBM46Q8TBY0 533 aaKnown RBP10.79□□□□□ -0.68
VCL-201ENST00000211998 TCP10LQ8TDR4 215 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 TLR10Q9BXR5 811 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 DGCR6LQ9BY27 220 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 ABCB10Q9NRK6 738 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 DNAAF2Q9NVR5 837 aaKnown RBP10.79□□□□□ -0.68
VCL-201ENST00000211998 STARD13Q9Y3M8 1113 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 PIPSLA2A3N6 862 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 PROCP04070 461 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 POLBP06746 335 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 CCR3P51677 355 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 NPEPPSP55786 919 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 RAD51Q06609 339 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 EDRF1Q3B7T1 1238 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 SPDYAQ5MJ70 313 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 PPP1R15BQ5SWA1 713 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 OTUD5Q96G74 571 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 NARS2Q96I59 477 aaKnown RBP10.79□□□□□ -0.68
VCL-201ENST00000211998 SP110Q9HB58 689 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 INTS13Q9NVM9 706 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 SLC39A10Q9ULF5 831 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 CHD1O14646 1710 aa10.79□□□□□ -0.68
VCL-201ENST00000211998 CENPXA8MT69 81 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 PARNO95453 639 aaKnown RBP10.78□□□□□ -0.68
VCL-201ENST00000211998 RBP3P10745 1247 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 NAA20P61599 178 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 MRPS22P82650 360 aaKnown RBP10.78□□□□□ -0.68
VCL-201ENST00000211998 PIGHQ14442 188 aaPredicted RBP10.78□□□□□ -0.68
VCL-201ENST00000211998 PTPAQ15257 358 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 RABL6Q3YEC7 729 aaPredicted RBP10.78□□□□□ -0.68
VCL-201ENST00000211998 OTUD3Q5T2D3 398 aaPredicted RBP10.78□□□□□ -0.68
VCL-201ENST00000211998 FAM45BPQ6NSW5 357 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 HAUS6Q7Z4H7 955 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 AKAP14Q86UN6 197 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 ATP8B4Q8TF62 1192 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 RSPH1Q8WYR4 309 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 COX4I2Q96KJ9 171 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 CITED4Q96RK1 184 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 ROGDIQ9GZN7 287 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 TRIM45Q9H8W5 580 aaPredicted RBP10.78□□□□□ -0.68
VCL-201ENST00000211998 JPH1Q9HDC5 661 aaPredicted RBP10.78□□□□□ -0.68
VCL-201ENST00000211998 ENTPD7Q9NQZ7 604 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 FAM217BQ9NTX9 383 aaPredicted RBP10.78□□□□□ -0.68
VCL-201ENST00000211998 ARHGEF38Q9NXL2 777 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 MAP3K20Q9NYL2 800 aaKnown RBP10.78□□□□□ -0.68
VCL-201ENST00000211998 CDC42BPBQ9Y5S2 1711 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 RALBP11234 206 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 TNFRSF8P28908 595 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 RPL21P46778 160 aaKnown RBP10.78□□□□□ -0.68
VCL-201ENST00000211998 SBK1Q52WX2 424 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 CENPPQ6IPU0 288 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 TTC23LQ6PF05 361 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 GALNT15Q8N3T1 639 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 EFHBQ8N7U6 833 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 GTF3C2Q8WUA4 911 aaPredicted RBP10.78□□□□□ -0.68
VCL-201ENST00000211998 AFG1LQ8WV93 481 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 KLHL3Q9UH77 587 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 PTGES3LE9PB15 166 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 PDE2AO00408 941 aaPredicted RBP10.78□□□□□ -0.68
VCL-201ENST00000211998 TBX3O15119 743 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 FOLH1Q04609 750 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 NFIXQ14938 502 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 VEPH1Q14D04 833 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 STRIP1Q5VSL9 837 aa10.78□□□□□ -0.68
VCL-201ENST00000211998 SRBD1Q8N5C6 995 aaKnown RBP10.78□□□□□ -0.68
VCL-201ENST00000211998 DHRSXQ8N5I4 330 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms