RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 PCDHA3Q9Y5H8 950 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 MAP2P11137 1827 aaKnown RBP12.43□□□□□ -0.42
TRO-201ENST00000173898 KIDINS220Q9ULH0 1771 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 C17orf102A2RUQ5 167 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 C16orf96A6NNT2 1141 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 H3BRB1 525 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 SLC2A3P11169 496 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 ODC1P11926 461 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 CDH2P19022 906 aaPredicted RBP12.43□□□□□ -0.42
TRO-201ENST00000173898 SLC12A3P55017 1021 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 BTKQ06187 659 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 MRNIPQ6NTE8 343 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 MFSD7Q6UXD7 560 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 TUBGCP3Q96CW5 907 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 CNDP1Q96KN2 507 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 MROH8Q9H579 483 aa12.43□□□□□ -0.42
TRO-201ENST00000173898 TUT1Q9H6E5 874 aaKnown RBP12.43□□□□□ -0.42
TRO-201ENST00000173898 TRIM45Q9H8W5 580 aaPredicted RBP12.43□□□□□ -0.42
TRO-201ENST00000173898 AAR2Q9Y312 384 aaKnown RBP12.43□□□□□ -0.42
TRO-201ENST00000173898 MYO1GB0I1T2 1018 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 TISP43B9A030 160 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 HSPA1AP0DMV8 641 aaKnown RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 HSPA1BP0DMV9 641 aaKnown RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 ATP6V1B1P15313 513 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 PECAM1P16284 738 aaPredicted RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 BGNP21810 368 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 SERPINB5P36952 375 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 CASP5P51878 434 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 ARHGEF7Q14155 803 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 KRT72Q14CN4 511 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 AASDHQ4L235 1098 aaPredicted RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 ADGRF2Q8IZF7 708 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 CERKQ8TCT0 537 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 ZNF711Q9Y462 761 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 CFAP99D6REC4 459 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 KIF1CO43896 1103 aaKnown RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 CLASP2O75122 1294 aaKnown RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 RALBP11234 206 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 INSRRP14616 1297 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 THPOP40225 353 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 ELK3P41970 407 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 NUMBP49757 651 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 ST8SIA6P61647 398 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 STRA8Q7Z7C7 330 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 TSEN2Q8NCE0 465 aaKnown RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 ZSWIM2Q8NEG5 633 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 KAT5Q92993 513 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 GLT1D1Q96MS3 346 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 IDI2Q9BXS1 227 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 KCNQ5Q9NR82 932 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 IARS2Q9NSE4 1012 aaKnown RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 BLOC1S6Q9UL45 172 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 SUFUQ9UMX1 484 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 RUVBL2Q9Y230 463 aaKnown RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 PCDHGC5Q9Y5F6 944 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 BCL9O00512 1426 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 CES2O00748 559 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 SOAT2O75908 522 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 SERPIND1P05546 499 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 KRT16P08779 473 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 TGFB3P10600 412 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 THRAP10827 490 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 ACADSP16219 412 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 SSTR1P30872 391 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 DDX53Q86TM3 631 aaKnown RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 ATP6V0D2Q8N8Y2 350 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 FAM136AQ96C01 138 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 VCPIP1Q96JH7 1222 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 OSMRQ99650 979 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 CCT7Q99832 543 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 PCDHB8Q9UN66 801 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 VWA5AO00534 786 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 XPO1O14980 1071 aaKnown RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 EPHB6O15197 1021 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 MAN1A2O60476 641 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 TFE3P19532 575 aaPredicted RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 SERPINB8P50452 374 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 CSE1LP55060 971 aaKnown RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 RPL10AP62906 217 aaKnown RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 MPP3Q13368 585 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 RASA2Q15283 850 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 ADCK2Q7Z695 626 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 ZBTB45Q96K62 511 aaPredicted RBP12.42□□□□□ -0.42
TRO-201ENST00000173898 SPATC1LQ9H0A9 340 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 DCLRE1BQ9H816 532 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 EFCAB1Q9HAE3 211 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 CYP4F12Q9HCS2 524 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 UBP1Q9NZI7 540 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 TSPAN16Q9UKR8 245 aa12.42□□□□□ -0.42
TRO-201ENST00000173898 DNALI1O14645 258 aaPredicted RBP12.41□□□□□ -0.42
TRO-201ENST00000173898 KLRC4O43908 158 aa12.41□□□□□ -0.42
TRO-201ENST00000173898 CPA3P15088 417 aa12.41□□□□□ -0.42
TRO-201ENST00000173898 HLA-DPA1P20036 260 aa12.41□□□□□ -0.42
TRO-201ENST00000173898 ATICP31939 592 aa12.41□□□□□ -0.42
TRO-201ENST00000173898 CDH8P55286 799 aa12.41□□□□□ -0.42
TRO-201ENST00000173898 LY6KQ17RY6 165 aa12.41□□□□□ -0.42
TRO-201ENST00000173898 FBXO47Q5MNV8 452 aa12.41□□□□□ -0.42
TRO-201ENST00000173898 EFL1Q7Z2Z2 1120 aaKnown RBP12.41□□□□□ -0.42
TRO-201ENST00000173898 UNC45BQ8IWX7 931 aa12.41□□□□□ -0.42
TRO-201ENST00000173898 SCUBE1Q8IWY4 988 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms