RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Pcyox1Q9CQF9 505 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Elp3Q9CZX0 547 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Polr3hQ9D2C6 204 aaKnown RBP12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Ppp1r12aQ9DBR7 1029 aaKnown RBP12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Cpsf3Q9QXK7 684 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Nfs1Q9Z1J3 459 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Foxm1O08696 760 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Ppargc1aO70343 797 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Shoc2O88520 582 aaKnown RBP12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Ccng1P51945 294 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Slc38a5Q3U1J0 479 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 C6.1alQ7M757 291 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 NfascQ810U3 1240 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Ccdc40Q8BI79 1192 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 SowahaQ8BLS7 548 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Rfx5Q9JL61 658 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Apol8A2VDH7 339 aaKnown RBP12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Timm44O35857 452 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Magea6O89010 325 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 CalrP14211 416 aaKnown RBP12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Tfdp2Q64163 446 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Chn2Q80XD1 332 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Dars2Q8BIP0 653 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Arhgap24Q8C4V1 747 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 PlvapQ91VC4 438 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Pcdhb2Q91Y00 799 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Tspan17Q9D7W4 270 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Vwa7Q9JHA8 891 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Usp34Q6ZQ93 3582 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Clk2O35491 499 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 SpibO35906 267 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 PrphP15331 475 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Rfx2P48379 717 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Rpl10aP53026 217 aaKnown RBP12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Dab2P98078 766 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Gm8773Q3UQ24 132 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Esyt3Q5DTI8 891 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Heatr9Q5QNV8 569 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Tas2r102Q7M717 329 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Ankrd45Q810N6 248 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Dclre1bQ8C7W7 541 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Lrp8Q924X6 996 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Foxp3Q99JB6 429 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Hars2Q99KK9 505 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Q9CPS8 106 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Vta1Q9CR26 309 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Dach1Q9QYB2 751 aa12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Abt1Q9QYL7 269 aaKnown RBP12.56□□□□□ -0.4
Herc4-208ENSMUST00000219577 Serpinb9O08797 374 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 ZfxP17012 799 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Ces1cP23953 554 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Ccndbp1Q3TVC7 356 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 C2cd2lQ80X80 706 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Pggt1bQ8BUY9 377 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Trim32Q8CH72 655 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Trip10Q8CJ53 603 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Rassf9Q8K342 435 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Ptdss1Q99LH2 473 aaKnown RBP12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Arl8bQ9CQW2 186 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Rnf14Q9JI90 485 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Trpc5Q9QX29 975 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 SufuQ9Z0P7 484 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Gm6370A0A0G2JGX9 315 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Lilra5D3Z7A9 295 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Vmn2r104E9Q2J5 860 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Gm7694J3QNH8 270 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Gm6309L7N481 315 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 PtgisO35074 501 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Acot1O55137 419 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Hoxc13P50207 328 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Prkaa1Q5EG47 559 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Tcaf3Q6QR59 914 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Lsm8Q6ZWM4 96 aaKnown RBP12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Ireb2Q811J3 963 aaKnown RBP12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Dcun1d2Q8BZJ7 259 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Olfr784Q8VFZ9 319 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Ctu1Q99J10 420 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Sh2d3cQ9QZS8 854 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Hsd17b14E9Q3D4 273 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 ChkaO54804 453 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 ShdO88834 343 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Foxp2P58463 714 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Ddr1Q03146 911 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Togaram2Q3TYG6 1002 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Fam198aQ3UY90 562 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 PighQ5M9N4 188 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Chi3l1Q61362 389 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Trpa1Q8BLA8 1125 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Trub1Q8C0D0 338 aaKnown RBP12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 TfQ921I1 697 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Stk33Q924X7 491 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Dok4Q99KE3 325 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 CmasQ99KK2 432 aaKnown RBP12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Q9D4A5 307 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Ccdc103Q9D9P2 237 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Mpp5Q9JLB2 675 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Iigp1Q9QZ85 413 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 Ror1Q9Z139 937 aa12.55□□□□□ -0.4
Herc4-208ENSMUST00000219577 4931406B18RikA2RSL7 367 aa12.54□□□□□ -0.4
Herc4-208ENSMUST00000219577 Celf5D3Z4T1 395 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms