RNA–Protein interactions for RNA: ENSMUST00000165964.7

Lig1-210, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-210ENSMUST00000165964 Rpap3Q9D706 660 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Mrps9Q9D7N3 390 aaKnown RBP12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Oma1Q9D8H7 521 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 PatjQ63ZW7 1834 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Olfr1305A2AVW3 312 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Bmpr2O35607 1038 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Pgk1P09411 417 aaKnown RBP12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Hoxc6P10629 235 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Lmnb1P14733 588 aaKnown RBP12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 ItgavP43406 1044 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 SftpdP50404 374 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Usp10P52479 792 aaKnown RBP12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Gabrb2P63137 512 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Q3TQQ9 903 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Mphosph8Q3TYA6 858 aaKnown RBP12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Znf746Q3U133 652 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Samhd1Q60710 627 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Itih3Q61704 889 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 ScapQ6GQT6 1276 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Dusp16Q6PCP3 660 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Cand2Q6ZQ73 1235 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Ppme1Q8BVQ5 386 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Hdac7Q8C2B3 938 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 TdrpQ8C5P7 182 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Tfb1mQ8JZM0 345 aaKnown RBP12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Smyd2Q8R5A0 433 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Ddx39aQ8VDW0 427 aaKnown RBP12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Scyl1Q9EQC5 806 aaKnown RBP12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Cpsf3Q9QXK7 684 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Ly6iQ9WU67 134 aa12.7□□□□□ -0.38
Lig1-210ENSMUST00000165964 Tatdn2B7ZNL9 783 aaKnown RBP12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Svs3aF2Z472 265 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Gm379J3QQ19 296 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Nek2O35942 443 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 MafgO54790 162 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Mxi1P50540 228 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 LbpQ61805 481 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Gigyf2Q6Y7W8 1291 aaKnown RBP12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 RimklbQ80WS1 387 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Neto2Q8BNJ6 525 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Slc38a7Q8BWH0 463 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Tor1aip2Q8BYU6 502 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Svs3bQ8BZH8 265 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 OgtQ8CGY8 1046 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Stau2Q8CJ67 570 aaKnown RBP12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Acvr1cQ8K348 493 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Cd248Q91V98 765 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 PlvapQ91VC4 438 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Rnf112Q96DY5 654 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Q9D1Z2 194 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Dclre1aQ9JIC3 1026 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Ccr10Q9JL21 362 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Trip11E9Q512 1976 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Fndc3c1Q6DFV6 1356 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 C130060K24RikG3UWA8 416 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Spin2fJ3QPU0 254 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Gsta4P24472 222 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Vav1P27870 845 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 G3bp2P97379 482 aaKnown RBP12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Nsun2Q1HFZ0 757 aaKnown RBP12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Cand1Q6ZQ38 1230 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 PrcpQ7TMR0 491 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Elac2Q80Y81 831 aaKnown RBP12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Trub1Q8C0D0 338 aaKnown RBP12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Atg16l1Q8C0J2 607 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Cog3Q8CI04 820 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Kat14Q8CID0 779 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Angel2Q8K1C0 544 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Nudcd3Q8R1N4 363 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 AenQ9CZI9 336 aaKnown RBP12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 4933428M09RikQ9D3X3 192 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Klhl41A2AUC9 606 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Gm20721E9Q2U8 318 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Slc10a3P21129 473 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 ItgalP24063 1163 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Dlg3P70175 849 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Ripply1Q2WG77 201 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Xlr3aQ60595 226 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Nudt16Q6P3D0 195 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 ItpkcQ7TS72 678 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Ip6k2Q80V72 448 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Ppp1r12bQ8BG95 976 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Dcun1d2Q8BZJ7 259 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Pdk3Q922H2 415 aaKnown RBP12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Txndc12Q9CQU0 170 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Tssk3Q9D2E1 268 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 MlklQ9D2Y4 472 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Ubxn11Q9D572 484 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 Gins2Q9D600 185 aa12.69□□□□□ -0.38
Lig1-210ENSMUST00000165964 SktA2AQ25 1946 aaKnown RBP12.68□□□□□ -0.38
Lig1-210ENSMUST00000165964 Ism2D3Z6A3 493 aa12.68□□□□□ -0.38
Lig1-210ENSMUST00000165964 Glb1P23780 647 aa12.68□□□□□ -0.38
Lig1-210ENSMUST00000165964 Arid5aQ3U108 590 aa12.68□□□□□ -0.38
Lig1-210ENSMUST00000165964 Ino80dQ66JY2 873 aaKnown RBP12.68□□□□□ -0.38
Lig1-210ENSMUST00000165964 Garem2Q6PAJ3 880 aa12.68□□□□□ -0.38
Lig1-210ENSMUST00000165964 LdhdQ7TNG8 484 aa12.68□□□□□ -0.38
Lig1-210ENSMUST00000165964 Tmem74Q8BQU7 305 aa12.68□□□□□ -0.38
Lig1-210ENSMUST00000165964 Phactr3Q8BYK5 558 aa12.68□□□□□ -0.38
Lig1-210ENSMUST00000165964 Pgm5Q8BZF8 567 aa12.68□□□□□ -0.38
Lig1-210ENSMUST00000165964 Trim61Q8JZK6 461 aa12.68□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms