RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Phactr1Q2M3X8 580 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Gm4952Q5FW57 296 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Arhgap44Q5SSM3 814 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Krt42Q6IFX2 452 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Znf784Q8BI69 297 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Glis1Q8K1M4 789 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Appl1Q8K3H0 707 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Riok3Q9DBU3 519 aaKnown RBP13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Atp11cQ9QZW0 1129 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Stat2Q9WVL2 923 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Clca3bE9PUL3 1044 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Acvr2bP27040 536 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Cyp2c38P56655 490 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Gdpd4Q3TT99 632 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Sco1Q5SUC9 284 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Olfr1057Q7TR75 315 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Sept8Q8CHH9 429 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Wdr11Q8K1X1 1223 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Dach1Q9QYB2 751 aa13.91□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Fam71aB7XG49 585 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Hsf3D0VYS2 492 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 SelenovD3YXG1 328 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Cdr1E9Q0B4 517 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Nkx1-1G3UXB3 402 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Rag1P15919 1040 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Mapre1Q61166 268 aaKnown RBP13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Il33Q8BVZ5 266 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Ulbp1Q8HWA3 334 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Epn3Q91W69 636 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 GgcxQ9QYC7 757 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Gm8369E9PZI3 166 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Klhl33G3UW92 533 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Shmt1P50431 478 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Myo1gQ5SUA5 1024 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Olfr412Q7TRW7 312 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Pdk1Q8BFP9 434 aaKnown RBP13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Dis3lQ8C0S1 1053 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Nol6Q8R5K4 1152 aaKnown RBP13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Atpaf2Q91YY4 289 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 GzmnQ920S1 248 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Mrps22Q9CXW2 359 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Kif12Q9D2Z8 642 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Pitpnm1O35954 1243 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Gjd2O54851 321 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 StrnO55106 780 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Hoxb8P09632 243 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Hoxc6P10629 235 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Acsl1P41216 699 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Scarf2P59222 833 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Serpina5P70458 405 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 VcpQ01853 806 aaKnown RBP13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Chsy1Q6ZQ11 800 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Slitrk1Q810C1 696 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Olfr1502Q8VG66 316 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Fbxo32Q9CPU7 355 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 RptorQ8K4Q0 1335 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Btaf1E9QAE3 1848 aa13.9□□□□□ -0.18
Clcn3-204ENSMUST00000110301 Ankfn1A0A140LIW7 1083 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Lcn6A2AJB9 181 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Pate3B3GLJ3 98 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Vmn2r100E9QAZ9 850 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Zfy1P10925 782 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Hoxc13P50207 328 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Cyp2c37P56654 490 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Ext2P70428 718 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Cyp2c54Q6XVG2 490 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Olfr698Q7TRN4 311 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Ticam2Q8BJQ4 232 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Ppfia2Q8BSS9 1257 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Sbk1Q8QZX0 417 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Gstt4Q9D4P7 240 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Tmem86aQ9D8N3 241 aa13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Ddx39bQ9Z1N5 428 aaKnown RBP13.9□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Gm27029A2A4P4 543 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Serpini1O35684 410 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Tnfrsf18O35714 228 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Tap2P36371 702 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Cul4aQ3TCH7 759 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Dusp11Q6NXK5 321 aaKnown RBP13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 P3h4Q8K2B0 443 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Kdelr1Q99JH8 212 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Psmd9Q9CR00 222 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 KynuQ9CXF0 464 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Atrnl1Q6A051 1378 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Ptchd4B9EKX1 904 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 FancfE9Q5Z5 343 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Mup5P11591 180 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Bpifb5Q3UQ05 490 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Nsmce1Q9D720 266 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Orc3Q9JK30 715 aaKnown RBP13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 0610012G03RikA0A0J9YTR2 95 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 EsrraO08580 422 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Npas2P97460 816 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Sdr16c6Q05A13 316 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Tmem120bQ3TA38 339 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 OtulinQ3UCV8 352 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Afap1l2Q5DTU0 825 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Mvb12bQ6KAU4 317 aa13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Recql4Q75NR7 1216 aaKnown RBP13.89□□□□□ -0.19
Clcn3-204ENSMUST00000110301 Zswim6Q80TB7 1207 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 68.8 ms