RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

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Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Prl2c3P04768 224 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Rc3h2P0C090 1187 aaKnown RBP12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 LmnaP48678 665 aaKnown RBP12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Rrp1P56183 494 aaKnown RBP12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 VegfcP97953 415 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Trim72Q1XH17 477 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Foxr1Q3UTB7 268 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Rhox12Q4TU81 186 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 DbhQ64237 622 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Atg9bQ6EBV9 922 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Bfsp2Q6NVD9 416 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Pced1aQ6P1Z5 449 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Spon2Q8BMS2 330 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Kctd6Q8BNL5 237 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Afap1l1Q8BZI0 768 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Angel1Q8VCU0 667 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 CbsQ91WT9 561 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Pcdhgb1Q91XX8 918 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ube2sQ921J4 223 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Tab2Q99K90 693 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 PinlypQ9CQD7 212 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Raver1Q9CW46 748 aaKnown RBP12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Acbd6Q9D061 282 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Fthl17aQ9DAX0 182 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 IkbkeQ9R0T8 717 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Elf4Q9Z2U4 655 aa12.89□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Il17dA0A0B4J1G4 205 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Vsig10l2A0A140LHF2 776 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gm13089A2AGW7 455 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Spata31E9QAF0 1014 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 LipiF6YQT7 476 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Dmp1O55188 503 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 MpoP11247 718 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 IvlP48997 467 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 NfkbidQ2TB02 327 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Tubal3Q3UX10 446 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Klhl23Q6GQU2 558 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ggnbp1Q6K1E7 370 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Sit1Q8C503 180 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Pym1Q8CHP5 203 aaKnown RBP12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Dhcr24Q8VCH6 516 aaKnown RBP12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Epn3Q91W69 636 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ttc1Q91Z38 292 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Tlr3Q99MB1 905 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 CatsperzQ9CQP8 194 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Pard3bQ9CSB4 1203 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Trmt11Q9CWH5 460 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ddit4Q9D3F7 229 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ccdc89Q9DA73 370 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Slc26a3Q9WVC8 757 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Anapc7Q9WVM3 565 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Knop1Q9Z2Q2 478 aaKnown RBP12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Rpl9-ps1S4R1R7 191 aa12.88□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Tcf20Q9EPQ8 1987 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Klhl41A2AUC9 606 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Tmem235B1AQL3 211 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 9630041A04RikD3Z3U4 205 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gm21293E9Q4G9 266 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Bin1O08539 588 aaKnown RBP12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Kcnh2O35219 1162 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Cyp4a14O35728 507 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Krt13P08730 437 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Nfkb1P25799 971 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Adssl1P28650 457 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Hmgb1P63158 215 aaKnown RBP12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ceacam5Q3UKK2 947 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Lrch2Q3UMG5 773 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 MlipQ5FW52 269 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Znf512Q69Z99 562 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Zcchc2Q69ZB8 1166 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Znf423Q80TS5 1292 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ankrd45Q810N6 248 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Bnc2Q8BMQ3 1127 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ints6lQ8BND4 861 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Tmx4Q8C0L0 335 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ldlrap1Q8C142 308 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Thop1Q8C1A5 687 aaKnown RBP12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Fam114a2Q8VE88 497 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Lysmd3Q99LE3 305 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Syce1Q9D495 329 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Sh3bgrQ9WUZ7 214 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Pcm1Q9R0L6 2025 aa12.87□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gm3854A0A1B0GSS6 495 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gm27029A2A4P4 543 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Lcn6A2AJB9 181 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Gm5934D3Z4U6 212 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 CenpcP49452 906 aaKnown RBP12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 RalaP63321 206 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Cd244Q07763 397 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Ccdc110Q3V125 848 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Igbp1Q61249 340 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 EregQ61521 162 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Foxj1Q61660 421 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Pabpc2Q62029 628 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Adam6bQ6IMH7 756 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Xpo1Q6P5F9 1071 aaKnown RBP12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Znf821Q6PD05 413 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Rasa4Q6PFQ7 802 aa12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Tra2aQ6PFR5 281 aaKnown RBP12.86□□□□□ -0.35
Ccdc28b-202ENSMUST00000106035 Prl3a1Q78Y73 227 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms