RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 4930513O06RikQ9D549 161 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Sept14Q9DA97 430 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gkap1Q9JMB0 366 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Trbv12-1A0A0B4J1H0 124 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Rpl9-ps6A0A140T8T4 192 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Bfsp1A2AMT1 669 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Dpy19l1A6X919 746 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Atp2c2A7L9Z8 944 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 AU018091E9PWS4 684 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Abhd12bG3UZN6 359 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 H2-LP01897 362 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 H2-Q10P01898 325 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 LtkP08923 888 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 PrphP15331 475 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Prim2P33610 505 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Rpl9P51410 192 aaKnown RBP9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gucy2eP52785 1108 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Atp6v1dP57746 247 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Slc12a3P59158 1002 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Anks1aP59672 1150 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Nol4P60954 483 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ube2hP62257 183 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Phf12Q5SPL2 1003 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Adora2aQ60613 410 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Serpinb6Q60854 378 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ezh2Q61188 746 aaKnown RBP9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Olfr867Q7TRF3 331 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tigd4Q8BUZ3 513 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cabcoco1Q8CDT7 208 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 MafaQ8CF90 359 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Olfr769Q8K501 312 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Prelid1Q8R107 217 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Plagl2Q925T4 496 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Stard3nlQ9DCI3 235 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ndst4Q9EQW8 872 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Kif9Q9WV04 790 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gab2Q9Z1S8 665 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Slc8a3S4R2P9 928 aa9.49□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Snapc4Q8BP86 1333 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Olfr1084A0A1L1STZ9 313 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 SlxD3Z347 212 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Wdr95D3Z7A8 784 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tpp1O89023 562 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 GfapP03995 430 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cyp11b2P15539 500 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Slc12a1P55014 1095 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 PtgdrP70263 357 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Coq7P97478 217 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Txn2P97493 166 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Atp8b2P98199 1209 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 HgsnatQ3UDW8 656 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 LchnQ3UHG7 455 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tsg101Q61187 391 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Myo6Q64331 1265 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Zcchc2Q69ZB8 1166 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cep70Q6IQY5 616 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Stk38lQ7TSE6 464 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Acat3Q80X81 397 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tmem220Q8BP07 167 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 PcgF3Q8BTQ0 241 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ccdc28bQ8CEG5 200 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 CherpQ8CGZ0 936 aaKnown RBP9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Utp4Q8R2N2 686 aaKnown RBP9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ces1dQ8VCT4 565 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Lnx2Q91XL2 687 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 ZwintQ9CQU5 252 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ehd4Q9EQP2 541 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tlr4Q9QUK6 835 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Itgb6Q9Z0T9 787 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Lcmt1A0A0U1RNF2 332 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Catsper2A2ARP9 588 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Lonrf2B2RT44 518 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cdh19E9Q3A7 770 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Myo1eE9Q634 1107 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm10722F6VLK5 217 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm5814J3QP80 125 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 ColqO35348 457 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 B3galt2O54905 422 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cyp4a10O88833 509 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Znf703P0CL69 594 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tbxas1P36423 533 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Idh2P54071 452 aaKnown RBP9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 AurkaP97477 395 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Akap4Q60662 849 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ifit2Q64112 472 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tbc1d31Q6NXY1 996 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Plppr4Q7TME0 766 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Zbtb5Q7TQG0 670 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Trim23Q8BGX0 574 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Depdc1bQ8BH88 529 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Abcf3Q8K268 709 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Vmn1r205Q8R276 316 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cadm3Q99N28 396 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Znf524Q9D0B1 321 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Adck1Q9D0L4 525 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Jam3Q9D8B7 310 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cacng3Q9JJV5 315 aa9.48□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ms4a14A0A087WSD2 1232 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Card6E9PWH2 1175 aa9.47□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ppef1O35655 650 aa9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms